RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 VAT1LQ9HCJ6 419 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 CD248Q9HCU0 757 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 DMAC2Q9NW81 257 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 TBC1D7Q9P0N9 293 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 PPARGC1AQ9UBK2 798 aaKnown RBP6.19□□□□□ -1.42
VPS33B-203ENST00000554264 KCNG1Q9UIX4 513 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 DNAJC12Q9UKB3 198 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 GTF3C4Q9UKN8 822 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 TANC1Q9C0D5 1861 aa6.19□□□□□ -1.42
VPS33B-203ENST00000554264 SCN10AQ9Y5Y9 1956 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 H3BNC9 293 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 H3BQ06 376 aaPredicted RBP6.18□□□□□ -1.42
VPS33B-203ENST00000554264 NFIBO00712 420 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 NBNO60934 754 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 ZC3H11AO75152 810 aaKnown RBP eCLIP6.18□□□□□ -1.42
VPS33B-203ENST00000554264 CAND2O75155 1236 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 MED24O75448 989 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 AMHP03971 560 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 CKBP12277 381 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 CCNB1P14635 433 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 GLDCP23378 1020 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 EDNRBP24530 442 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 TMOD1P28289 359 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 GTF2H1P32780 548 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 PLTPP55058 493 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 MFAP3P55082 362 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 SNAP25P60880 206 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 SATB1Q01826 763 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 BFSP1Q12934 665 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 BNIP1Q12981 228 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 PPP2R5CQ13362 524 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 PRPF4BQ13523 1007 aaKnown RBP6.18□□□□□ -1.42
VPS33B-203ENST00000554264 PTK6Q13882 451 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 CTTNQ14247 550 aaKnown RBP6.18□□□□□ -1.42
VPS33B-203ENST00000554264 SLC29A2Q14542 456 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 DRAP1Q14919 205 aaPredicted RBP6.18□□□□□ -1.42
VPS33B-203ENST00000554264 GPNMBQ14956 572 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 CNGA2Q16280 664 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 GALNTL6Q49A17 601 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 CCDC137Q6PK04 289 aaKnown RBP6.18□□□□□ -1.42
VPS33B-203ENST00000554264 ZDHHC24Q6UX98 284 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 RNF207Q6ZRF8 634 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 SPATA21Q7Z572 469 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 ZNF677Q86XU0 584 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 SLC13A5Q86YT5 568 aaPredicted RBP6.18□□□□□ -1.42
VPS33B-203ENST00000554264 LMNTD2Q8IXW0 634 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 SAMD3Q8N6K7 520 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 C7orf31Q8N865 590 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 CCDC89Q8N998 374 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 LNX1Q8TBB1 728 aaPredicted RBP6.18□□□□□ -1.42
VPS33B-203ENST00000554264 FBXO25Q8TCJ0 367 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 CKAP2Q8WWK9 683 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 KLHL29Q96CT2 875 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 SNF8Q96H20 258 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 C17orf80Q9BSJ5 609 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 KATNAL1Q9BW62 490 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 UBA5Q9GZZ9 404 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 NEUROG2Q9H2A3 272 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 ST6GALNAC4Q9H4F1 302 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 ZHX3Q9H4I2 956 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 RABEP2Q9H5N1 569 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 AZI2Q9H6S1 392 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 GOLGA2P5Q9HBQ8 144 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 ARHGEF3Q9NR81 526 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 GPR27Q9NS67 375 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 SIRT5Q9NXA8 310 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 GRHL1Q9NZI5 618 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 CTTNBP2NLQ9P2B4 639 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 LARSQ9P2J5 1176 aaKnown RBP6.18□□□□□ -1.42
VPS33B-203ENST00000554264 CNOT8Q9UFF9 292 aaKnown RBP6.18□□□□□ -1.42
VPS33B-203ENST00000554264 FETUBQ9UGM5 382 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 BAIAP2L1Q9UHR4 511 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 CORO1CQ9ULV4 474 aaPredicted RBP6.18□□□□□ -1.42
VPS33B-203ENST00000554264 SMG5Q9UPR3 1016 aaKnown RBP6.18□□□□□ -1.42
VPS33B-203ENST00000554264 EXOC7Q9UPT5 735 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 TRAF6Q9Y4K3 522 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 PCDHA3Q9Y5H8 950 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 PCDHA1Q9Y5I3 950 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 ALG6Q9Y672 507 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 X6R8D5 127 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 EMSYQ7Z589 1322 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 SCN5AQ14524 2016 aa6.18□□□□□ -1.42
VPS33B-203ENST00000554264 REV3LO60673 3130 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 TRANK1O15050 2925 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 MAGEB2O15479 319 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 SPOPO43791 374 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 EDIL3O43854 480 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 HIP1RO75146 1068 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 SEMA7AO75326 666 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 TTC4O95801 387 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 TSPAN15O95858 294 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 GH1P01241 217 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 CYP1A2P05177 515 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 ATP5BP06576 529 aaKnown RBP6.17□□□□□ -1.42
VPS33B-203ENST00000554264 MMP3P08254 477 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 TSHRP16473 764 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 COILP38432 576 aaPredicted RBP6.17□□□□□ -1.42
VPS33B-203ENST00000554264 BPIFB4P59827 614 aa6.17□□□□□ -1.42
VPS33B-203ENST00000554264 RNASE9P60153 205 aaKnown RBP6.17□□□□□ -1.42
VPS33B-203ENST00000554264 MRPS25P82663 173 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms