RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 BRMS1LQ5PSV4 323 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 MPP7Q5T2T1 576 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 TTC39BQ5VTQ0 682 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-209ENST00000553855 FYB2Q5VWT5 728 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 ACAD10Q6JQN1 1059 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 DNAJC24Q6P3W2 148 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 DCUN1D2Q6PH85 259 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 CEP68Q76N32 757 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 SYT13Q7L8C5 426 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 ANKS1BQ7Z6G8 1248 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 LONP2Q86WA8 852 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 C12orf40Q86WS4 652 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 MFN1Q8IWA4 741 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 CHPFQ8IZ52 775 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 CCDC33Q8N5R6 958 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 ZNF513Q8N8E2 541 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-209ENST00000553855 TSTD1Q8NFU3 115 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 SLC30A5Q8TAD4 765 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 WFIKKN2Q8TEU8 576 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 NKD2Q969F2 451 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-209ENST00000553855 FCRL2Q96LA5 508 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-209ENST00000553855 CIPCQ9C0C6 399 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 XPO4Q9C0E2 1151 aaKnown RBP8.63□□□□□ -1.03
PSEN1-209ENST00000553855 FBRSL1Q9HCM7 1045 aaKnown RBP8.63□□□□□ -1.03
PSEN1-209ENST00000553855 PRMT8Q9NR22 394 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-209ENST00000553855 METTL5Q9NRN9 209 aaKnown RBP8.63□□□□□ -1.03
PSEN1-209ENST00000553855 FAM86C1Q9NVL1 165 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 AIPL1Q9NZN9 384 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 BCCIPQ9P287 314 aaKnown RBP eCLIP8.63□□□□□ -1.03
PSEN1-209ENST00000553855 STOML2Q9UJZ1 356 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 PLA2G4CQ9UP65 541 aa8.63□□□□□ -1.03
PSEN1-209ENST00000553855 ITIH6Q6UXX5 1313 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 A0A0A0MRY4 1105 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 GOLGA6L7A0A1B0GV03 622 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 FAM170AA1A519 330 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 TMCO5BA8MYB1 307 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 KCNU1A8MYU2 1149 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 J3QL48 77 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 K7EQS6 105 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 SYNCRIPO60506 623 aaKnown RBP8.62□□□□□ -1.03
PSEN1-209ENST00000553855 PAPSS2O95340 614 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-209ENST00000553855 APBB3O95704 486 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 IGLV3-27P01718 113 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 ATP5BP06576 529 aaKnown RBP8.62□□□□□ -1.03
PSEN1-209ENST00000553855 UNGP13051 313 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-209ENST00000553855 TIMP2P16035 220 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 PDGFRAP16234 1089 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 CHRNB2P17787 502 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 POLR2EP19388 210 aaKnown RBP8.62□□□□□ -1.03
PSEN1-209ENST00000553855 TACR2P21452 398 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 NTSR1P30989 418 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 DGKEP52429 567 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 ST8SIA6P61647 398 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 BYSLQ13895 437 aaKnown RBP8.62□□□□□ -1.03
PSEN1-209ENST00000553855 C2CD6Q53TS8 623 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 PIK3R6Q5UE93 754 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 RNF219Q5W0B1 726 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-209ENST00000553855 RAP1GAP2Q684P5 730 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 NAIF1Q69YI7 327 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-209ENST00000553855 SPECC1LQ69YQ0 1117 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 HEATR6Q6AI08 1181 aaKnown RBP8.62□□□□□ -1.03
PSEN1-209ENST00000553855 ALG1LQ6GMV1 187 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 RFWD3Q6PCD5 774 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 TSSK4Q6SA08 328 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 ARCQ7LC44 396 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 IRF2BP2Q7Z5L9 587 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 PHF13Q86YI8 300 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-209ENST00000553855 FAM217AQ8IXS0 508 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 LGI2Q8N0V4 545 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 AHI1Q8N157 1196 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 PGBD3Q8N328 593 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 CARNMT1Q8N4J0 409 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 TXNDC5Q8NBS9 432 aaKnown RBP8.62□□□□□ -1.03
PSEN1-209ENST00000553855 USP33Q8TEY7 942 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 SYN2Q92777 582 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-209ENST00000553855 SLC39A13Q96H72 371 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 PIWIL1Q96J94 861 aaKnown RBP8.62□□□□□ -1.03
PSEN1-209ENST00000553855 VCPIP1Q96JH7 1222 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 RPRD1AQ96P16 312 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-209ENST00000553855 TRIM5Q9C035 493 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 SIK2Q9H0K1 926 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 DEF6Q9H4E7 631 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 HAUS4Q9H6D7 363 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 ZNF395Q9H8N7 513 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-209ENST00000553855 MMP17Q9ULZ9 603 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 CAPN11Q9UMQ6 739 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 SLC27A6Q9Y2P4 619 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 SCINQ9Y6U3 715 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 HELZP42694 1942 aaKnown RBP8.62□□□□□ -1.03
PSEN1-209ENST00000553855 ZDBF2Q9HCK1 2354 aa8.62□□□□□ -1.03
PSEN1-209ENST00000553855 CCDC163A0A0D9SF12 145 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 GFRA2O00451 464 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 AXIN1O15169 862 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 RTN2O75298 545 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 IGLV3-25P01717 112 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 SERPING1P05155 500 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 MYBL1P10243 752 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 PABPC1P11940 636 aaKnown RBP8.61□□□□□ -1.03
PSEN1-209ENST00000553855 HOXB2P14652 356 aa8.61□□□□□ -1.03
PSEN1-209ENST00000553855 PCSK2P16519 638 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms