RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 QKIQ96PU8 341 aaKnown RBP eCLIP14.14□□□□□ -0.15
APEX1-205ENST00000553555 DDX50Q9BQ39 737 aaKnown RBP14.14□□□□□ -0.15
APEX1-205ENST00000553555 DPH5Q9H2P9 285 aa14.14□□□□□ -0.15
APEX1-205ENST00000553555 NDFIP2Q9NV92 336 aa14.14□□□□□ -0.15
APEX1-205ENST00000553555 TMEM248Q9NWD8 314 aa14.14□□□□□ -0.15
APEX1-205ENST00000553555 ZMYM5Q9UJ78 669 aa14.14□□□□□ -0.15
APEX1-205ENST00000553555 ARHGAP26Q9UNA1 814 aa14.14□□□□□ -0.15
APEX1-205ENST00000553555 SNX24Q9Y343 169 aa14.14□□□□□ -0.15
APEX1-205ENST00000553555 LEFTY2O00292 366 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 NCAM2O15394 837 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 LINC01565O15544 149 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 ETS1P14921 441 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 H2AFXP16104 143 aaPredicted RBP14.13□□□□□ -0.15
APEX1-205ENST00000553555 IVDP26440 423 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 RPL21P46778 160 aaKnown RBP14.13□□□□□ -0.15
APEX1-205ENST00000553555 GALNT2Q10471 571 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 CUL1Q13616 776 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 ARHGAP12Q8IWW6 846 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 CCDC89Q8N998 374 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 FAM71DQ8N9W8 422 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 LRRN4Q8WUT4 740 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 TFB1MQ8WVM0 346 aaKnown RBP14.13□□□□□ -0.15
APEX1-205ENST00000553555 IFT81Q8WYA0 676 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 RTP4Q96DX8 246 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 LGMNQ99538 433 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 PRDM12Q9H4Q4 367 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 RETREG1Q9H6L5 497 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 PCDH9Q9HC56 1237 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 DONSONQ9NYP3 566 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 CFAP97Q9P2B7 532 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 ZNF212Q9UDV6 495 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 ASIC3Q9UHC3 531 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 LSM7Q9UK45 103 aaKnown RBP14.13□□□□□ -0.15
APEX1-205ENST00000553555 ZNF510Q9Y2H8 683 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 MRPS23Q9Y3D9 190 aaKnown RBP14.13□□□□□ -0.15
APEX1-205ENST00000553555 CDH23Q9H251 3354 aa14.13□□□□□ -0.15
APEX1-205ENST00000553555 CCDC151A5D8V7 595 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 PPP1R12AO14974 1030 aaPredicted RBP14.12□□□□□ -0.15
APEX1-205ENST00000553555 KCNN4O15554 427 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 IFNB1P01574 187 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 ZSCAN5DPP0CG00 497 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 MYBL2P10244 700 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 CEBPBP17676 345 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 MX2P20592 715 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 AVPR1AP37288 418 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 ADAM15Q13444 863 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 PRKD1Q15139 912 aaPredicted RBP14.12□□□□□ -0.15
APEX1-205ENST00000553555 RABGAP1LQ5R372 815 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 RARS2Q5T160 578 aaKnown RBP14.12□□□□□ -0.15
APEX1-205ENST00000553555 AFMIDQ63HM1 303 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 POTEHQ6S545 545 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 FAM217AQ8IXS0 508 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 UMODL1-AS1Q8N2C9 162 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 EIF1ADQ8N9N8 165 aaKnown RBP14.12□□□□□ -0.15
APEX1-205ENST00000553555 ITFG1Q8TB96 612 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 CCHCR1Q8TD31 782 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 CELF6Q96J87 481 aaKnown RBP14.12□□□□□ -0.15
APEX1-205ENST00000553555 BRD8Q9H0E9 1235 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 SMG9Q9H0W8 520 aaKnown RBP14.12□□□□□ -0.15
APEX1-205ENST00000553555 SH3BP1Q9Y3L3 701 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 VAV1P15498 845 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 RPL22P35268 128 aaKnown RBP14.12□□□□□ -0.15
APEX1-205ENST00000553555 ADCY8P40145 1251 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 MLLT1Q03111 559 aaPredicted RBP14.12□□□□□ -0.15
APEX1-205ENST00000553555 AP1B1Q10567 949 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 HEATR6Q6AI08 1181 aaKnown RBP14.12□□□□□ -0.15
APEX1-205ENST00000553555 ANKRD54Q6NXT1 300 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 SYCE2Q6PIF2 218 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 FBXO38Q6PIJ6 1188 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 GPR149Q86SP6 731 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 CFAP52Q8N1V2 620 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 CCNYQ8ND76 341 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 USP13Q92995 863 aaPredicted RBP14.12□□□□□ -0.15
APEX1-205ENST00000553555 HDAC11Q96DB2 347 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 ZSWIM3Q96MP5 696 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 SLC39A8Q9C0K1 460 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 TTYH1Q9H313 450 aaPredicted RBP14.12□□□□□ -0.15
APEX1-205ENST00000553555 NOL6Q9H6R4 1146 aaKnown RBP14.12□□□□□ -0.15
APEX1-205ENST00000553555 TDP1Q9NUW8 608 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 ARGLU1Q9NWB6 273 aaPredicted RBP14.12□□□□□ -0.15
APEX1-205ENST00000553555 GRHL1Q9NZI5 618 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 NFU1Q9UMS0 254 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 COLQQ9Y215 455 aaPredicted RBP14.12□□□□□ -0.15
APEX1-205ENST00000553555 CCL26Q9Y258 94 aa14.12□□□□□ -0.15
APEX1-205ENST00000553555 ZFP37Q9Y6Q3 630 aaPredicted RBP14.12□□□□□ -0.15
APEX1-205ENST00000553555 DOCK8Q8NF50 2099 aa14.11□□□□□ -0.15
APEX1-205ENST00000553555 TMEM265A0A087WTH1 108 aa14.11□□□□□ -0.15
APEX1-205ENST00000553555 E2F8A0AVK6 867 aa14.11□□□□□ -0.15
APEX1-205ENST00000553555 GFRA2O00451 464 aa14.11□□□□□ -0.15
APEX1-205ENST00000553555 TRDMT1O14717 391 aaKnown RBP14.11□□□□□ -0.15
APEX1-205ENST00000553555 TSPAN3O60637 253 aa14.11□□□□□ -0.15
APEX1-205ENST00000553555 ITIH2P19823 946 aa14.11□□□□□ -0.15
APEX1-205ENST00000553555 ECHS1P30084 290 aa14.11□□□□□ -0.15
APEX1-205ENST00000553555 GARSP41250 739 aaKnown RBP14.11□□□□□ -0.15
APEX1-205ENST00000553555 MAPKAPK2P49137 400 aa14.11□□□□□ -0.15
APEX1-205ENST00000553555 VPS41P49754 854 aa14.11□□□□□ -0.15
APEX1-205ENST00000553555 NDST2P52849 883 aa14.11□□□□□ -0.15
APEX1-205ENST00000553555 NRLP54845 237 aa14.11□□□□□ -0.15
APEX1-205ENST00000553555 CDH4P55283 916 aa14.11□□□□□ -0.15
APEX1-205ENST00000553555 PPIDQ08752 370 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms