RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 HADHAP40939 763 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 TPI1P60174 286 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 HIC1Q14526 733 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 PLCD3Q8N3E9 789 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 MCUR1Q96AQ8 359 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 PGBD4Q96DM1 585 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 CERS2Q96G23 380 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 SENP8Q96LD8 212 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 NUDCD1Q96RS6 583 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 EPAS1Q99814 870 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 SYT15Q9BQS2 421 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 CADM1Q9BY67 442 aaKnown RBP13.24□□□□□ -0.29
SHMT2-205ENST00000553474 MCOLN1Q9GZU1 580 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.24□□□□□ -0.294e-7■■□□□ 13.4
SHMT2-205ENST00000553474 C1orf21Q9H246 121 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 UGT1A7Q9HAW7 530 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 UGT1A10Q9HAW8 530 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 UGT1A8Q9HAW9 530 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 WDR6Q9NNW5 1121 aaKnown RBP13.24□□□□□ -0.29
SHMT2-205ENST00000553474 KRT82Q9NSB4 513 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 PIGVQ9NUD9 493 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 ARL8BQ9NVJ2 186 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 BFARQ9NZS9 450 aa13.24□□□□□ -0.29
SHMT2-205ENST00000553474 FAM237BA0A1B0GVD1 139 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 CAPN14A8MX76 684 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 DIAPH2O60879 1101 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 USP1O94782 785 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 PGK1P00558 417 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 ALDOAP04075 364 aaKnown RBP13.23□□□□□ -0.29
SHMT2-205ENST00000553474 THP07101 528 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 MYL3P08590 195 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 C6orf222P0C671 652 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-205ENST00000553474 CCL5P13501 91 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 ERCC2P18074 760 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 MGAT1P26572 445 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 HTR7P34969 479 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 PDE1BQ01064 536 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 NME3Q13232 169 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 DNAL1Q4LDG9 190 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 MDH1BQ5I0G3 518 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 SYPL2Q5VXT5 272 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 PID1Q7Z2X4 250 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 TMEM135Q86UB9 458 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 FAM35AQ86V20 835 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 LCA5Q86VQ0 697 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 ARID3BQ8IVW6 561 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-205ENST00000553474 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.23□□□□□ -0.292e-6■■■■■ 41.4
SHMT2-205ENST00000553474 ARRDC4Q8NCT1 418 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 PPP1R14CQ8TAE6 165 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 PIWIL2Q8TC59 973 aaKnown RBP13.23□□□□□ -0.29
SHMT2-205ENST00000553474 SMARCD1Q96GM5 515 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 PPP1R2P1Q96PQ5 205 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 MIPEPQ99797 713 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 MAGEB5Q9BZ81 275 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 RNF208Q9H0X6 261 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 CSNK1G1Q9HCP0 422 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 XPNPEP3Q9NQH7 507 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 FBXO6Q9NRD1 293 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-205ENST00000553474 NSMCE4AQ9NXX6 385 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 KLHL8Q9P2G9 620 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-205ENST00000553474 STOML1Q9UBI4 398 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 GIT1Q9Y2X7 761 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 HBS1LQ9Y450 684 aaKnown RBP13.23□□□□□ -0.29
SHMT2-205ENST00000553474 LRRC42Q9Y546 428 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 NUMBLQ9Y6R0 609 aa13.23□□□□□ -0.29
SHMT2-205ENST00000553474 F8W8V4 182 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 LIN7AO14910 233 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-205ENST00000553474 PLIN3O60664 434 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 AP1G2O75843 785 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 BEST1O76090 585 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 LTFP02788 710 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 FYNP06241 537 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 SPRP35270 261 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-205ENST00000553474 MAGEA12P43365 314 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 NPY2RP49146 381 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 RAP1GDS1P52306 607 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 MAP3K7CLP57077 242 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 SESN2P58004 480 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-205ENST00000553474 MRPS6P82932 125 aaKnown RBP13.22□□□□□ -0.29
SHMT2-205ENST00000553474 PURAQ00577 322 aaKnown RBP13.22□□□□□ -0.29
SHMT2-205ENST00000553474 BEX3Q00994 111 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 FSCN1Q16658 493 aaKnown RBP13.22□□□□□ -0.29
SHMT2-205ENST00000553474 ACCSLQ4AC99 568 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 FASTKD1Q53R41 847 aaKnown RBP13.22□□□□□ -0.29
SHMT2-205ENST00000553474 ARMC3Q5W041 872 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 SLC7A14Q8TBB6 771 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 PPP4R1Q8TF05 950 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 SREK1Q8WXA9 508 aaKnown RBP13.22□□□□□ -0.29
SHMT2-205ENST00000553474 N4BP2L2Q92802 583 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-205ENST00000553474 MECRQ9BV79 373 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 ULBP1Q9BZM6 244 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 NMUR2Q9GZQ4 415 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 DENND2DQ9H6A0 471 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-205ENST00000553474 CASS4Q9NQ75 786 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 CRTAC1Q9NQ79 661 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 FAM105AQ9NUU6 356 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 TAS2R1Q9NYW7 299 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 RPS6KL1Q9Y6S9 549 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 ARHGEF37A1IGU5 675 aa13.22□□□□□ -0.29
SHMT2-205ENST00000553474 CLDN5O00501 218 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms