RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 GRNP28799 593 aaKnown RBP12.95□□□□□ -0.34
SNRPF-204ENST00000552085 PSMD8P48556 350 aa12.95□□□□□ -0.34
SNRPF-204ENST00000552085 MAP3K7CLP57077 242 aa12.95□□□□□ -0.34
SNRPF-204ENST00000552085 HNRNPA1L2Q32P51 320 aaKnown RBP12.95□□□□□ -0.34
SNRPF-204ENST00000552085 POM121L1PQ3SYA9 428 aa12.95□□□□□ -0.34
SNRPF-204ENST00000552085 C9orf64Q5T6V5 341 aa12.95□□□□□ -0.34
SNRPF-204ENST00000552085 ZNF720Q7Z2F6 126 aa12.95□□□□□ -0.34
SNRPF-204ENST00000552085 FUKQ8N0W3 1084 aa12.95□□□□□ -0.34
SNRPF-204ENST00000552085 ZNF276Q8N554 614 aa12.95□□□□□ -0.34
SNRPF-204ENST00000552085 C9orf43Q8TAL5 461 aaPredicted RBP12.95□□□□□ -0.34
SNRPF-204ENST00000552085 MYO19Q96H55 970 aa12.95□□□□□ -0.34
SNRPF-204ENST00000552085 CSNK1G1Q9HCP0 422 aa12.95□□□□□ -0.34
SNRPF-204ENST00000552085 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.95□□□□□ -0.34
SNRPF-204ENST00000552085 CUEDC1Q9NWM3 386 aaPredicted RBP12.95□□□□□ -0.34
SNRPF-204ENST00000552085 RASAL2Q9UJF2 1139 aa12.95□□□□□ -0.34
SNRPF-204ENST00000552085 EXOC7Q9UPT5 735 aa12.95□□□□□ -0.34
SNRPF-204ENST00000552085 PCDHB11Q9Y5F2 797 aa12.95□□□□□ -0.34
SNRPF-204ENST00000552085 F8P00451 2351 aa12.95□□□□□ -0.34
SNRPF-204ENST00000552085 CASC3O15234 703 aaKnown RBP12.94□□□□□ -0.34
SNRPF-204ENST00000552085 ADH1BP00325 375 aa12.94□□□□□ -0.34
SNRPF-204ENST00000552085 KRT7P08729 469 aa12.94□□□□□ -0.34
SNRPF-204ENST00000552085 GARTP22102 1010 aa12.94□□□□□ -0.34
SNRPF-204ENST00000552085 DDIT3P35638 169 aa12.94□□□□□ -0.34
SNRPF-204ENST00000552085 ST8SIA6P61647 398 aa12.94□□□□□ -0.34
SNRPF-204ENST00000552085 SPIDRQ14159 915 aa12.94□□□□□ -0.34
SNRPF-204ENST00000552085 WDR72Q3MJ13 1102 aa12.94□□□□□ -0.34
SNRPF-204ENST00000552085 SETMARQ53H47 684 aaPredicted RBP12.94□□□□□ -0.34
SNRPF-204ENST00000552085 PERM1Q5SV97 790 aa12.94□□□□□ -0.34
SNRPF-204ENST00000552085 CAPRIN2Q6IMN6 1127 aaKnown RBP12.94□□□□□ -0.34
SNRPF-204ENST00000552085 RSRC2Q7L4I2 434 aaKnown RBP12.94□□□□□ -0.34
SNRPF-204ENST00000552085 GPRIN1Q7Z2K8 1008 aa12.94□□□□□ -0.34
SNRPF-204ENST00000552085 MAMDC2Q7Z304 686 aaPredicted RBP12.94□□□□□ -0.34
SNRPF-204ENST00000552085 EPB41L5Q9HCM4 733 aa12.94□□□□□ -0.34
SNRPF-204ENST00000552085 NAGPAQ9UK23 515 aa12.94□□□□□ -0.34
SNRPF-204ENST00000552085 LIMCH1Q9UPQ0 1083 aa12.94□□□□□ -0.34
SNRPF-204ENST00000552085 A0A087X0B3 334 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 VWA3AA6NCI4 1184 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 SEMA7AO75326 666 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 VPS4BO75351 444 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 PPP1R37O75864 691 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 CST3P01034 146 aaPredicted RBP12.93□□□□□ -0.34
SNRPF-204ENST00000552085 RALAP11233 206 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 HGFP14210 728 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 PSEN1P49768 467 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 KCNA1Q09470 495 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 EFEMP1Q12805 493 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 DRAP1Q14919 205 aaPredicted RBP12.93□□□□□ -0.34
SNRPF-204ENST00000552085 NR0B2Q15466 257 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 C1QL3Q5VWW1 255 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.93□□□□□ -0.34
SNRPF-204ENST00000552085 TRIM69Q86WT6 500 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 ZFAND4Q86XD8 727 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 DTX1Q86Y01 620 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 FAM184AQ8NB25 1140 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 MOCOSQ96EN8 888 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 IFT43Q96FT9 208 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 TNIP3Q96KP6 325 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 CDK5RAP1Q96SZ6 601 aaKnown RBP12.93□□□□□ -0.34
SNRPF-204ENST00000552085 FAM129BQ96TA1 746 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 CALN1Q9BXU9 219 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 PISDQ9UG56 409 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 VPS4AQ9UN37 437 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 PCDHA5Q9Y5H7 936 aa12.93□□□□□ -0.34
SNRPF-204ENST00000552085 SETD2Q9BYW2 2564 aaPredicted RBP12.93□□□□□ -0.34
SNRPF-204ENST00000552085 PRAMEF33A0A0G2JMD5 474 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 TARSL2A2RTX5 802 aaKnown RBP12.92□□□□□ -0.34
SNRPF-204ENST00000552085 TMX2-CTNND1H3BSU7 103 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 PRAMEF10O60809 474 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 RNGTTO60942 597 aaKnown RBP12.92□□□□□ -0.34
SNRPF-204ENST00000552085 JMJD7P0C870 316 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 GNLYP22749 145 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 CD70P32970 193 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 DRD3P35462 400 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 ARID5BQ14865 1188 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 SURF1Q15526 300 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 RILPL1Q5EBL4 403 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 ARL6IP4Q66PJ3 421 aaKnown RBP12.92□□□□□ -0.34
SNRPF-204ENST00000552085 TRAPPC11Q7Z392 1133 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 B3GNT8Q7Z7M8 397 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 SCD5Q86SK9 330 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 TMEM145Q8NBT3 493 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 AK8Q96MA6 479 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 ACCSQ96QU6 501 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 CBWD1Q9BRT8 395 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 STRA6Q9BX79 667 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 STRADBQ9C0K7 418 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 PCIF1Q9H4Z3 704 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 SYNDIG1Q9H7V2 258 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 SALL4Q9UJQ4 1053 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 OTOGQ6ZRI0 2925 aa12.92□□□□□ -0.34
SNRPF-204ENST00000552085 HHLA1C9JL84 531 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 NTN3O00634 580 aaPredicted RBP12.91□□□□□ -0.34
SNRPF-204ENST00000552085 MUSKO15146 869 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 SLC7A4O43246 635 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 PLRG1O43660 514 aaKnown RBP12.91□□□□□ -0.34
SNRPF-204ENST00000552085 DDAH2O95865 285 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 PRR29P0C7W0 189 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 CCDC130P13994 396 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 MLLT10P55197 1068 aa12.91□□□□□ -0.34
SNRPF-204ENST00000552085 HNRNPKP61978 463 aaKnown RBP eCLIP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms