RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 O00370 1275 aa12.47□□□□□ -0.41
NR4A1-215ENST00000550557 SPAG7O75391 227 aa12.47□□□□□ -0.41
NR4A1-215ENST00000550557 ARIH2O95376 493 aa12.47□□□□□ -0.41
NR4A1-215ENST00000550557 LCA5LO95447 670 aa12.47□□□□□ -0.41
NR4A1-215ENST00000550557 PBX3P40426 434 aa12.47□□□□□ -0.41
NR4A1-215ENST00000550557 WASP42768 502 aa12.47□□□□□ -0.41
NR4A1-215ENST00000550557 FAM83EQ2M2I3 478 aa12.47□□□□□ -0.41
NR4A1-215ENST00000550557 OTOP3Q7RTS5 596 aa12.47□□□□□ -0.41
NR4A1-215ENST00000550557 C12orf29Q8N999 325 aa12.47□□□□□ -0.41
NR4A1-215ENST00000550557 ACTL9Q8TC94 416 aa12.47□□□□□ -0.41
NR4A1-215ENST00000550557 BADQ92934 168 aa12.47□□□□□ -0.41
NR4A1-215ENST00000550557 KAT5Q92993 513 aa12.47□□□□□ -0.41
NR4A1-215ENST00000550557 MRPL45Q9BRJ2 306 aaKnown RBP12.47□□□□□ -0.41
NR4A1-215ENST00000550557 UPF3AQ9H1J1 476 aaKnown RBP12.47□□□□□ -0.41
NR4A1-215ENST00000550557 MRPL40Q9NQ50 206 aaKnown RBP12.47□□□□□ -0.41
NR4A1-215ENST00000550557 NDOR1Q9UHB4 597 aa12.47□□□□□ -0.41
NR4A1-215ENST00000550557 IGLV3-22A0A075B6J6 115 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 TGFB1I1O43294 461 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 PFDN1O60925 122 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 CSF2RAP15509 400 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 AMD1P17707 334 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 KDSRQ06136 332 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 ZNF844Q08AG5 666 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 ACAP1Q15027 740 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 TRAPPC5Q8IUR0 188 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 COLGALT1Q8NBJ5 622 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 FAM136AQ96C01 138 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 NRBF2Q96F24 287 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 SLC9A7Q96T83 725 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 GPR88Q9GZN0 384 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 DUS2Q9NX74 493 aaKnown RBP12.46□□□□□ -0.41
NR4A1-215ENST00000550557 SPASTQ9UBP0 616 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 AGRPO00253 132 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 MIPP30301 263 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 HIC1Q14526 733 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 PDCD2Q16342 344 aaPredicted RBP12.46□□□□□ -0.41
NR4A1-215ENST00000550557 INSCQ1MX18 579 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 INTS6LQ5JSJ4 861 aaKnown RBP12.46□□□□□ -0.41
NR4A1-215ENST00000550557 CASP10Q92851 521 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 SPACA7Q96KW9 195 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 MYOCQ99972 504 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 CEP41Q9BYV8 373 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 ATP13A3Q9H7F0 1226 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 NMRK1Q9NWW6 199 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 SELENONQ9NZV5 590 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 CDH16O75309 829 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 SNAI1O95863 264 aaPredicted RBP12.46□□□□□ -0.41
NR4A1-215ENST00000550557 SULT2A1Q06520 285 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 MARK2Q7KZI7 788 aaKnown RBP12.46□□□□□ -0.41
NR4A1-215ENST00000550557 ZNF438Q7Z4V0 828 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 IRF2BP2Q7Z5L9 587 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 NOD2Q9HC29 1040 aa12.46□□□□□ -0.41
NR4A1-215ENST00000550557 KIAA1522Q9P206 1035 aaPredicted RBP12.46□□□□□ -0.41
NR4A1-215ENST00000550557 E2F8A0AVK6 867 aa12.46□□□□□ -0.42
NR4A1-215ENST00000550557 ALOX15P16050 662 aaPredicted RBP12.46□□□□□ -0.42
NR4A1-215ENST00000550557 GRSF1Q12849 480 aaKnown RBP eCLIP12.46□□□□□ -0.42
NR4A1-215ENST00000550557 MPPE1Q53F39 396 aa12.46□□□□□ -0.42
NR4A1-215ENST00000550557 TMEM63BQ5T3F8 832 aa12.46□□□□□ -0.42
NR4A1-215ENST00000550557 HGSNATQ68CP4 663 aa12.46□□□□□ -0.42
NR4A1-215ENST00000550557 KRT80Q6KB66 452 aa12.46□□□□□ -0.42
NR4A1-215ENST00000550557 OSCP1Q8WVF1 389 aa12.46□□□□□ -0.42
NR4A1-215ENST00000550557 ATG4AQ8WYN0 398 aa12.46□□□□□ -0.42
NR4A1-215ENST00000550557 BSNDQ8WZ55 320 aa12.46□□□□□ -0.42
NR4A1-215ENST00000550557 MBOAT7Q96N66 472 aa12.46□□□□□ -0.42
NR4A1-215ENST00000550557 RAD9AQ99638 391 aa12.46□□□□□ -0.42
NR4A1-215ENST00000550557 FAM167BQ9BTA0 163 aa12.46□□□□□ -0.42
NR4A1-215ENST00000550557 ARHGAP28Q9P2N2 729 aa12.46□□□□□ -0.42
NR4A1-215ENST00000550557 TRHDEQ9UKU6 1024 aa12.46□□□□□ -0.42
NR4A1-215ENST00000550557 SUFUQ9UMX1 484 aa12.46□□□□□ -0.42
NR4A1-215ENST00000550557 TIAM2Q8IVF5 1701 aa12.46□□□□□ -0.42
NR4A1-215ENST00000550557 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.45□□□□□ -0.42
NR4A1-215ENST00000550557 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.45□□□□□ -0.42
NR4A1-215ENST00000550557 XPO1O14980 1071 aaKnown RBP12.45□□□□□ -0.42
NR4A1-215ENST00000550557 FSBPO95073 299 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 ZNF7P17097 686 aaPredicted RBP12.45□□□□□ -0.42
NR4A1-215ENST00000550557 ITGA8P53708 1063 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 JAG1P78504 1218 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 DAB2P98082 770 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 BOP1Q14137 746 aaKnown RBP12.45□□□□□ -0.42
NR4A1-215ENST00000550557 C17orf99Q6UX52 265 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 SPDL1Q96EA4 605 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 CAPN10Q9HC96 672 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 NRP1O14786 923 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 GYG2O15488 501 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 F2P00734 622 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 MAGEA4P43358 317 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 ERVK-21P61565 698 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 POU6F1Q14863 301 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 GLT6D1Q7Z4J2 308 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 EIF1ADQ8N9N8 165 aaKnown RBP12.45□□□□□ -0.42
NR4A1-215ENST00000550557 EPS8L3Q8TE67 593 aaKnown RBP12.45□□□□□ -0.42
NR4A1-215ENST00000550557 PCMTD2Q9NV79 361 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 MYH6P13533 1939 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 C5orf58C9J3I9 102 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 PSMD12O00232 456 aaPredicted RBP12.45□□□□□ -0.42
NR4A1-215ENST00000550557 PER2O15055 1255 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 HAUS5O94927 633 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 RPN2P04844 631 aa12.45□□□□□ -0.42
NR4A1-215ENST00000550557 SNRPAP09012 282 aaKnown RBP12.45□□□□□ -0.42
NR4A1-215ENST00000550557 CCND1P24385 295 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms