RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 R3HDM2Q9Y2K5 976 aaKnown RBP10.59□□□□□ -0.71
RAB5C-207ENST00000550504 NR2E1Q9Y466 385 aa10.59□□□□□ -0.71
RAB5C-207ENST00000550504 HEY1Q9Y5J3 304 aa10.59□□□□□ -0.71
RAB5C-207ENST00000550504 MRFAP1Q9Y605 127 aa10.59□□□□□ -0.71
RAB5C-207ENST00000550504 REV3LO60673 3130 aa10.59□□□□□ -0.71
RAB5C-207ENST00000550504 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.58□□□□□ -0.72
RAB5C-207ENST00000550504 A0A1B0GVM2 712 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 TCAF2A6NFQ2 919 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 ZNF487B1APH4 448 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 ANHXE9PGG2 379 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 NEDD8-MDP1E9PL57 170 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 H0Y626 953 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 GFRA2O00451 464 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 KRIT1O00522 736 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 MFSD11O43934 449 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 ECI2O75521 394 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 CYBBP04839 570 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 CYP17A1P05093 508 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 PECAM1P16284 738 aaPredicted RBP10.58□□□□□ -0.72
RAB5C-207ENST00000550504 ZFXP17010 805 aaPredicted RBP10.58□□□□□ -0.72
RAB5C-207ENST00000550504 GDI1P31150 447 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 NUMBP49757 651 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 CDH4P55283 916 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 GBE1Q04446 702 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 TNK2Q07912 1038 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 FCHO2Q0JRZ9 810 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 KLF1Q13351 362 aaPredicted RBP10.58□□□□□ -0.72
RAB5C-207ENST00000550504 ZNF177Q13360 481 aaPredicted RBP10.58□□□□□ -0.72
RAB5C-207ENST00000550504 PDGFRLQ15198 375 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 EML3Q32P44 896 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 PUS10Q3MIT2 529 aaKnown RBP10.58□□□□□ -0.72
RAB5C-207ENST00000550504 C5orf22Q49AR2 442 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 RHBDF2Q6PJF5 856 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 NLRP14Q86W24 1093 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 ZDHHC14Q8IZN3 488 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 NPWQ8N729 165 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 RTL3Q8N8U3 475 aaKnown RBP10.58□□□□□ -0.72
RAB5C-207ENST00000550504 DEPDC1BQ8WUY9 529 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 ATG4AQ8WYN0 398 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 IRF7Q92985 503 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 NAP1L3Q99457 506 aaPredicted RBP10.58□□□□□ -0.72
RAB5C-207ENST00000550504 TRMT61BQ9BVS5 477 aaKnown RBP10.58□□□□□ -0.72
RAB5C-207ENST00000550504 BBS2Q9BXC9 721 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 SPHK2Q9NRA0 654 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 TMEM248Q9NWD8 314 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 LIMD1Q9UGP4 676 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 FAM50BQ9Y247 325 aa10.58□□□□□ -0.72
RAB5C-207ENST00000550504 WASH4PA8MWX3 477 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 CLDN11O75508 207 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 NFATC1O95644 943 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 ADH5P11766 374 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 TGM2P21980 687 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 HOXD9P28356 352 aaPredicted RBP10.57□□□□□ -0.72
RAB5C-207ENST00000550504 OR1E1P30953 314 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 OTUD4Q01804 1114 aaKnown RBP10.57□□□□□ -0.72
RAB5C-207ENST00000550504 CKAP4Q07065 602 aaKnown RBP10.57□□□□□ -0.72
RAB5C-207ENST00000550504 SLC10A2Q12908 348 aaPredicted RBP10.57□□□□□ -0.72
RAB5C-207ENST00000550504 TUBB2AQ13885 445 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 PAFAH1B3Q15102 231 aaKnown RBP10.57□□□□□ -0.72
RAB5C-207ENST00000550504 DHCR24Q15392 516 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 SIX1Q15475 284 aaPredicted RBP10.57□□□□□ -0.72
RAB5C-207ENST00000550504 WHAMMP3Q1A5X7 153 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 AAK1Q2M2I8 961 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 TTC39BQ5VTQ0 682 aaPredicted RBP10.57□□□□□ -0.72
RAB5C-207ENST00000550504 FYB2Q5VWT5 728 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 B4GALNT4Q76KP1 1039 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 CHST9Q7L1S5 443 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 MFN1Q8IWA4 741 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 CCDC117Q8IWD4 279 aaPredicted RBP10.57□□□□□ -0.72
RAB5C-207ENST00000550504 TP53INP2Q8IXH6 220 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 PLCD3Q8N3E9 789 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 KIAA1958Q8N8K9 716 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 NAT16Q8N8M0 369 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 ACTL9Q8TC94 416 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 LRRN4Q8WUT4 740 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 MAIP1Q8WWC4 291 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 C1orf54Q8WWF1 131 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 P3H4Q92791 437 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 ATP2A3Q93084 1043 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 FAM83CQ9BQN1 747 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 TUBB2BQ9BVA1 445 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 HPS4Q9NQG7 708 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 THEGQ9P2T0 379 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 RNF14Q9UBS8 474 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 ZNF212Q9UDV6 495 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 TTC7AQ9ULT0 858 aaPredicted RBP10.57□□□□□ -0.72
RAB5C-207ENST00000550504 CLEC4EQ9ULY5 219 aa10.57□□□□□ -0.72
RAB5C-207ENST00000550504 DOCK4Q8N1I0 1966 aa10.56□□□□□ -0.72
RAB5C-207ENST00000550504 KIF26AQ9ULI4 1882 aaPredicted RBP10.56□□□□□ -0.72
RAB5C-207ENST00000550504 GOLGA6L10A0A0M3HER8 536 aa10.56□□□□□ -0.72
RAB5C-207ENST00000550504 OTOL1A6NHN0 477 aaPredicted RBP10.56□□□□□ -0.72
RAB5C-207ENST00000550504 APOC4-APOC2K7ER74 178 aa10.56□□□□□ -0.72
RAB5C-207ENST00000550504 DFFAO00273 331 aa10.56□□□□□ -0.72
RAB5C-207ENST00000550504 CHADO15335 359 aa10.56□□□□□ -0.72
RAB5C-207ENST00000550504 LUC7L3O95232 432 aaKnown RBP10.56□□□□□ -0.72
RAB5C-207ENST00000550504 ADH1CP00326 375 aa10.56□□□□□ -0.72
RAB5C-207ENST00000550504 PENKP01210 267 aaPredicted RBP10.56□□□□□ -0.72
RAB5C-207ENST00000550504 APOC2P02655 101 aa10.56□□□□□ -0.72
RAB5C-207ENST00000550504 ASGR2P07307 311 aa10.56□□□□□ -0.72
RAB5C-207ENST00000550504 RHOCP08134 193 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms