RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 ALG14Q96F25 216 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 MSANTD3Q96H12 275 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 PNKPQ96T60 521 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 P2RY13Q9BPV8 354 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 FOXQ1Q9C009 403 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 ZYG11BQ9C0D3 744 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 NOL6Q9H6R4 1146 aaKnown RBP13.43□□□□□ -0.26
RAB5C-206ENST00000550406 DEC1Q9P2X7 70 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 INTS6Q9UL03 887 aaKnown RBP13.43□□□□□ -0.26
RAB5C-206ENST00000550406 TBC1D30Q9Y2I9 924 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 SLC27A6Q9Y2P4 619 aa13.43□□□□□ -0.26
RAB5C-206ENST00000550406 MUC22E2RYF6 1773 aaPredicted RBP13.43□□□□□ -0.26
RAB5C-206ENST00000550406 KANSL1LA0AUZ9 987 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 WASH4PA8MWX3 477 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 PRRT4C9JH25 899 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 K7EQS6 105 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 EEF2KO00418 725 aaKnown RBP13.42□□□□□ -0.26
RAB5C-206ENST00000550406 MAN2B1O00754 1011 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 CLDN11O75508 207 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 FTCDO95954 541 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 EGFP01133 1207 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 KRT7P08729 469 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 RHOQP17081 205 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 AMPD1P23109 780 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 CTNNA2P26232 953 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 TARSP26639 723 aaKnown RBP13.42□□□□□ -0.26
RAB5C-206ENST00000550406 MZF1P28698 734 aaPredicted RBP13.42□□□□□ -0.26
RAB5C-206ENST00000550406 CTNNA1P35221 906 aaKnown RBP13.42□□□□□ -0.26
RAB5C-206ENST00000550406 PEX5P50542 639 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 CDH6P55285 790 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 IFI16Q16666 785 aaKnown RBP13.42□□□□□ -0.26
RAB5C-206ENST00000550406 GRAMD4Q6IC98 578 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 RWDD4Q6NW29 188 aaKnown RBP13.42□□□□□ -0.26
RAB5C-206ENST00000550406 ZNF852Q6ZMS4 543 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 RFX8Q6ZV50 586 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 TFAP2DQ7Z6R9 452 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 MFN1Q8IWA4 741 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 CSPG4P5Q96PW8 444 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 EPAS1Q99814 870 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 KLC2Q9H0B6 622 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 TBC1D17Q9HA65 648 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 LTB4R2Q9NPC1 389 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 ARHGEF4Q9NR80 690 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 ETNK2Q9NVF9 386 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 TMEM248Q9NWD8 314 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 NDRG2Q9UN36 371 aaKnown RBP13.42□□□□□ -0.26
RAB5C-206ENST00000550406 PACSIN2Q9UNF0 486 aaPredicted RBP13.42□□□□□ -0.26
RAB5C-206ENST00000550406 MFHAS1Q9Y4C4 1052 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 PCDHA3Q9Y5H8 950 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 OR51B4Q9Y5P0 310 aa13.42□□□□□ -0.26
RAB5C-206ENST00000550406 SHROOM3Q8TF72 1996 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.41□□□□□ -0.26
RAB5C-206ENST00000550406 TMEM221A6NGB7 291 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 H0Y626 953 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 M0R296 226 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 DDX3YO15523 660 aaKnown RBP13.41□□□□□ -0.26
RAB5C-206ENST00000550406 ZSCAN12O43309 604 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 PSTPIP1O43586 416 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 KAT7O95251 611 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 CHRNB1P11230 501 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 ERCC2P18074 760 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 EPHB2P29323 1055 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 HTR7P34969 479 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 GRIA2P42262 883 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 TPI1P60174 286 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 AMPD2Q01433 879 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 ZNF177Q13360 481 aaPredicted RBP13.41□□□□□ -0.26
RAB5C-206ENST00000550406 CCINQ13939 588 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 TAZQ16635 292 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 EMC10Q5UCC4 262 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 CWF19L1Q69YN2 538 aaKnown RBP13.41□□□□□ -0.26
RAB5C-206ENST00000550406 MFSD7Q6UXD7 560 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 ADIPOR2Q86V24 386 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 APCDD1Q8J025 514 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 C17orf53Q8N3J3 647 aaPredicted RBP13.41□□□□□ -0.26
RAB5C-206ENST00000550406 RTL3Q8N8U3 475 aaKnown RBP13.41□□□□□ -0.26
RAB5C-206ENST00000550406 TERB1Q8NA31 727 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 NETO2Q8NC67 525 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 KCTD6Q8NC69 237 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 ALG3Q92685 438 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 FAF2Q96CS3 445 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 SHDQ96IW2 340 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 C11orf16Q9NQ32 467 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 KCND1Q9NSA2 647 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 RBM12Q9NTZ6 932 aaKnown RBP13.41□□□□□ -0.26
RAB5C-206ENST00000550406 ABCB8Q9NUT2 735 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.41□□□□□ -0.26
RAB5C-206ENST00000550406 AMFRQ9UKV5 643 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 BDP1A6H8Y1 2624 aa13.41□□□□□ -0.26
RAB5C-206ENST00000550406 TYW5A2RUC4 315 aaKnown RBP13.4□□□□□ -0.26
RAB5C-206ENST00000550406 FAM170BA6NMN3 283 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.4□□□□□ -0.26
RAB5C-206ENST00000550406 H3BRJ5 948 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 DCLK1O15075 740 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 PI15O43692 258 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 APODP05090 189 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 PABPC1P11940 636 aaKnown RBP13.4□□□□□ -0.26
RAB5C-206ENST00000550406 CSKP41240 450 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 NUMBP49757 651 aa13.4□□□□□ -0.26
RAB5C-206ENST00000550406 ZNF135P52742 658 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms