RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 OR2T3Q8NH03 318 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 C1orf216Q8TAB5 229 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 ADAM32Q8TC27 787 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 SORCS1Q8WY21 1168 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 SLC35C1Q96A29 364 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 TMA16Q96EY4 203 aaKnown RBP7.94□□□□□ -1.14
NEK3-201ENST00000550331 CAMK1GQ96NX5 476 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 MIR1-1HGQ9H1L0 117 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 LHX5Q9H2C1 402 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 ARMCX3Q9UH62 379 aaPredicted RBP7.94□□□□□ -1.14
NEK3-201ENST00000550331 PCDHGB2Q9Y5G2 931 aa7.94□□□□□ -1.14
NEK3-201ENST00000550331 FIGNL2A6NMB9 653 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 PMM2O15305 246 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 IRAK2O43187 625 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 SMC2O95347 1197 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 IGLV3-27P01718 113 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 ATP5BP06576 529 aaKnown RBP7.93□□□□□ -1.14
NEK3-201ENST00000550331 DLDP09622 509 aaKnown RBP7.93□□□□□ -1.14
NEK3-201ENST00000550331 PABPC1P11940 636 aaKnown RBP7.93□□□□□ -1.14
NEK3-201ENST00000550331 MATKP42679 507 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 SLC11A2P49281 568 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 AFF3P51826 1226 aaKnown RBP7.93□□□□□ -1.14
NEK3-201ENST00000550331 DAOAP59103 153 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 PNOCQ13519 176 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 STILQ15468 1287 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 FNDC3BQ53EP0 1204 aaKnown RBP7.93□□□□□ -1.14
NEK3-201ENST00000550331 NUGGCQ68CJ6 796 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 ANKRD40Q6AI12 368 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 LCLAT1Q6UWP7 414 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 DBX2Q6ZNG2 339 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 CHST9Q7L1S5 443 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 ADIPOR2Q86V24 386 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 CACUL1Q86Y37 369 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 UNC45BQ8IWX7 931 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 SPATA20Q8TB22 786 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 UBA3Q8TBC4 463 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 SLC35F5Q8WV83 523 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 IRGQQ8WZA9 623 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 NDRG1Q92597 394 aaKnown RBP7.93□□□□□ -1.14
NEK3-201ENST00000550331 EDEM1Q92611 657 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 AZIN2Q96A70 460 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 GAREM1Q9H706 876 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 METTL14Q9HCE5 456 aaKnown RBP7.93□□□□□ -1.14
NEK3-201ENST00000550331 OSGEPQ9NPF4 335 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 TM7SF3Q9NS93 570 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 ABCB8Q9NUT2 735 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 KIAA1522Q9P206 1035 aaPredicted RBP7.93□□□□□ -1.14
NEK3-201ENST00000550331 SFMBT1Q9UHJ3 866 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 EIF2B4Q9UI10 523 aaKnown RBP7.93□□□□□ -1.14
NEK3-201ENST00000550331 GGA2Q9UJY4 613 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 PCOLCE2Q9UKZ9 415 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.93□□□□□ -1.14
NEK3-201ENST00000550331 PLA2G4CQ9UP65 541 aa7.93□□□□□ -1.14
NEK3-201ENST00000550331 APOBEC2Q9Y235 224 aaKnown RBP7.93□□□□□ -1.14
NEK3-201ENST00000550331 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.93□□□□□ -1.14
NEK3-201ENST00000550331 TRIM49BA6NDI0 452 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 FLRT2O43155 660 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 MSI1O43347 362 aaKnown RBP7.92□□□□□ -1.14
NEK3-201ENST00000550331 TSPAN3O60637 253 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 SEMA4FO95754 770 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 DNTTP04053 509 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 PRB1P04280 392 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 HLA-EP13747 358 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 LCP1P13796 627 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 ACSL1P33121 698 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 PPP1R2P41236 205 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 GRIA4P48058 902 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 FMO5P49326 533 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 PMS1P54277 932 aaKnown RBP7.92□□□□□ -1.14
NEK3-201ENST00000550331 GUCA2AQ02747 115 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 C19orf57Q0VDD7 668 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 TEAD4Q15561 434 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 CNGA2Q16280 664 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 HLA-BQ31612 363 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 TTC31Q49AM3 519 aaPredicted RBP7.92□□□□□ -1.14
NEK3-201ENST00000550331 PIK3R6Q5UE93 754 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 MBLAC2Q68D91 279 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 FOXR2Q6PJQ5 311 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 TMEM270Q6UE05 265 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 BAHD1Q8TBE0 780 aaPredicted RBP7.92□□□□□ -1.14
NEK3-201ENST00000550331 CYB5D2Q8WUJ1 264 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 GOLGA1Q92805 767 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 SMARCE1Q969G3 411 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 HSFY1Q96LI6 401 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 NT5C1BQ96P26 610 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 CDC6Q99741 560 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 BTBD1Q9H0C5 482 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 C6orf106Q9H6K1 298 aaPredicted RBP7.92□□□□□ -1.14
NEK3-201ENST00000550331 IL21RQ9HBE5 538 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 GDPD2Q9HCC8 539 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 PRSS16Q9NQE7 514 aa7.92□□□□□ -1.14
NEK3-201ENST00000550331 HOOK1Q9UJC3 728 aaKnown RBP7.92□□□□□ -1.14
NEK3-201ENST00000550331 FNDC3AQ9Y2H6 1198 aaKnown RBP7.92□□□□□ -1.14
NEK3-201ENST00000550331 TYW5A2RUC4 315 aaKnown RBP7.91□□□□□ -1.14
NEK3-201ENST00000550331 GOLGA6L4A6NEF3 574 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 M0QYV0 167 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 PSMA7O14818 248 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 P4HA2O15460 535 aa7.91□□□□□ -1.14
NEK3-201ENST00000550331 SART1O43290 800 aaKnown RBP7.91□□□□□ -1.14
NEK3-201ENST00000550331 ACSL4O60488 711 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms