RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 IL18RAPO95256 599 aa23.65■■□□□ 1.38
NPAS3-206ENST00000548645 PKNOX1P55347 436 aa23.65■■□□□ 1.38
NPAS3-206ENST00000548645 CEACAM7Q14002 265 aa23.65■■□□□ 1.38
NPAS3-206ENST00000548645 IER5Q5VY09 327 aa23.65■■□□□ 1.38
NPAS3-206ENST00000548645 CMC1Q7Z7K0 106 aa23.65■■□□□ 1.38
NPAS3-206ENST00000548645 ERI1Q8IV48 349 aaKnown RBP23.65■■□□□ 1.38
NPAS3-206ENST00000548645 HACE1Q8IYU2 909 aa23.65■■□□□ 1.38
NPAS3-206ENST00000548645 RNF149Q8NC42 400 aa23.65■■□□□ 1.38
NPAS3-206ENST00000548645 PGBD4Q96DM1 585 aa23.65■■□□□ 1.38
NPAS3-206ENST00000548645 SH3BP1Q9Y3L3 701 aa23.65■■□□□ 1.38
NPAS3-206ENST00000548645 A0A0A0MRY4 1105 aa23.64■■□□□ 1.38
NPAS3-206ENST00000548645 TCF7P36402 384 aaPredicted RBP23.64■■□□□ 1.38
NPAS3-206ENST00000548645 GMPRP36959 345 aa23.64■■□□□ 1.38
NPAS3-206ENST00000548645 MS4A2Q01362 244 aa23.64■■□□□ 1.38
NPAS3-206ENST00000548645 AGR3Q8TD06 166 aa23.64■■□□□ 1.38
NPAS3-206ENST00000548645 HTR3CQ8WXA8 447 aa23.64■■□□□ 1.38
NPAS3-206ENST00000548645 RCN3Q96D15 328 aa23.64■■□□□ 1.38
NPAS3-206ENST00000548645 SPATA13Q96N96 652 aa23.64■■□□□ 1.38
NPAS3-206ENST00000548645 RPF1Q9H9Y2 349 aaKnown RBP23.64■■□□□ 1.38
NPAS3-206ENST00000548645 ZBTB12Q9Y330 459 aaPredicted RBP23.64■■□□□ 1.38
NPAS3-206ENST00000548645 NOP56O00567 594 aaKnown RBP23.64■■□□□ 1.37
NPAS3-206ENST00000548645 MSX2P35548 267 aaPredicted RBP23.64■■□□□ 1.37
NPAS3-206ENST00000548645 TRIML2Q8N7C3 387 aa23.64■■□□□ 1.37
NPAS3-206ENST00000548645 TSPAN14Q8NG11 270 aa23.64■■□□□ 1.37
NPAS3-206ENST00000548645 F5H423 210 aaPredicted RBP23.63■■□□□ 1.37
NPAS3-206ENST00000548645 POLBP06746 335 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 ERVK-10P10266 1014 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 ENO3P13929 434 aaPredicted RBP23.63■■□□□ 1.37
NPAS3-206ENST00000548645 CD1EP15812 388 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 ZNF23P17027 643 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 PROZP22891 400 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 ADSLP30566 484 aaPredicted RBP23.63■■□□□ 1.37
NPAS3-206ENST00000548645 MAGEA12P43365 314 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 LAMTOR4Q0VGL1 99 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 TMEM132AQ24JP5 1023 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 LCLAT1Q6UWP7 414 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 DCLK2Q8N568 766 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 ISL2Q96A47 359 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 CCT7Q99832 543 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 WDR55Q9H6Y2 383 aaPredicted RBP23.63■■□□□ 1.37
NPAS3-206ENST00000548645 WDR41Q9HAD4 459 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 EIF2B3Q9NR50 452 aaKnown RBP23.63■■□□□ 1.37
NPAS3-206ENST00000548645 TSPAN16Q9UKR8 245 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 G3V2L1 256 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 ITGB3P05106 788 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 CXCL8P10145 99 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 LPIN1Q14693 890 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 BSPRYQ5W0U4 402 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 PLD6Q8N2A8 252 aaKnown RBP23.63■■□□□ 1.37
NPAS3-206ENST00000548645 LRRC43Q8N309 656 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 COLGALT1Q8NBJ5 622 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 C2orf40Q9H1Z8 148 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 PDZD7Q9H5P4 517 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 DHX35Q9H5Z1 703 aaKnown RBP23.63■■□□□ 1.37
NPAS3-206ENST00000548645 PIH1D1Q9NWS0 290 aaKnown RBP23.63■■□□□ 1.37
NPAS3-206ENST00000548645 MATN2O00339 956 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 HDAC3O15379 428 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 HMGB2P26583 209 aaKnown RBP23.63■■□□□ 1.37
NPAS3-206ENST00000548645 ICAM3P32942 547 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 SPRP35270 261 aaPredicted RBP23.63■■□□□ 1.37
NPAS3-206ENST00000548645 PPARGP37231 505 aaPredicted RBP23.63■■□□□ 1.37
NPAS3-206ENST00000548645 RGS7P49802 495 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 ART3Q13508 389 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 MXD4Q14582 209 aaPredicted RBP23.63■■□□□ 1.37
NPAS3-206ENST00000548645 DPYSL2Q16555 572 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 ATF7IP2Q5U623 682 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 CPSF7Q8N684 471 aaKnown RBP23.63■■□□□ 1.37
NPAS3-206ENST00000548645 TMEM102Q8N9M5 508 aaPredicted RBP23.63■■□□□ 1.37
NPAS3-206ENST00000548645 USP13Q92995 863 aaPredicted RBP23.63■■□□□ 1.37
NPAS3-206ENST00000548645 CERS2Q96G23 380 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 RPS6KL1Q9Y6S9 549 aa23.63■■□□□ 1.37
NPAS3-206ENST00000548645 H0YJX3 145 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 NEMP1O14524 444 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 HNRNPCP07910 306 aaKnown RBP eCLIP23.62■■□□□ 1.37
NPAS3-206ENST00000548645 CYP3A5P20815 502 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 TPP2P29144 1249 aaPredicted RBP23.62■■□□□ 1.37
NPAS3-206ENST00000548645 OAZ1P54368 228 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 SFSWAPQ12872 951 aaKnown RBP23.62■■□□□ 1.37
NPAS3-206ENST00000548645 PPP2R5DQ14738 602 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 CYTH1Q15438 398 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 SMAD1Q15797 465 aaKnown RBP23.62■■□□□ 1.37
NPAS3-206ENST00000548645 STXBP2Q15833 593 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 LSM12Q3MHD2 195 aaKnown RBP23.62■■□□□ 1.37
NPAS3-206ENST00000548645 SEL1L3Q68CR1 1132 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 OLFML1Q6UWY5 402 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 PCYT2Q99447 389 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 SLC4A5Q9BY07 1137 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 PTPRHQ9HD43 1115 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 NFICP08651 508 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 ATICP31939 592 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 CDK9P50750 372 aaKnown RBP23.62■■□□□ 1.37
NPAS3-206ENST00000548645 STAT5BP51692 787 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 HK2P52789 917 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 HERC3Q15034 1050 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 ZNF554Q86TJ5 538 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 RNF148Q8N7C7 305 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 REPS2Q8NFH8 660 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 EME1Q96AY2 570 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 EFCAB1Q9HAE3 211 aa23.62■■□□□ 1.37
NPAS3-206ENST00000548645 SYBUQ9NX95 663 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms