RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 NAT16Q8N8M0 369 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 ATP6V0D2Q8N8Y2 350 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 TERB1Q8NA31 727 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 DDI1Q8WTU0 396 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 BTN2A3PQ96KV6 586 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 NAPGQ99747 312 aaPredicted RBP12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 ANLNQ9NQW6 1124 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 DNAJC17Q9NVM6 304 aaKnown RBP12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 DDIT4Q9NX09 232 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 STAP1Q9ULZ2 295 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 SNX10Q9Y5X0 201 aa12.11□□□□□ -0.47
TUBA1C-203ENST00000548470 KMT2EQ8IZD2 1858 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 KIF26AQ9ULI4 1882 aaPredicted RBP12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 TYW5A2RUC4 315 aaKnown RBP12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 CTAGE9A4FU28 777 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 I6L893 689 aaPredicted RBP12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 GFRA2O00451 464 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 LILRB5O75023 590 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 CISD3P0C7P0 127 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 TDGF1P13385 188 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 GGCXP38435 758 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 DGKEP52429 567 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 SATB1Q01826 763 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 DEUP1Q05D60 604 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 EIF4HQ15056 248 aaKnown RBP12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 LLGL1Q15334 1064 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 CA9Q16790 459 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 SLC25A52Q3SY17 297 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 Q6ZS52 159 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 BNIPLQ7Z465 357 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 CCDC117Q8IWD4 279 aaPredicted RBP12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 RPLP0P6Q8NHW5 317 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 UCMAQ8WVF2 138 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 CENPIQ92674 756 aaPredicted RBP12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 NKD2Q969F2 451 aaPredicted RBP12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 NT5C3BQ969T7 300 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 PGAP3Q96FM1 320 aaPredicted RBP12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 HES6Q96HZ4 224 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 SMARCAL1Q9NZC9 954 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 EBF1Q9UH73 591 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 MMP17Q9ULZ9 603 aa12.1□□□□□ -0.47
TUBA1C-203ENST00000548470 TICRRQ7Z2Z1 1910 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 K7ESF4 209 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 ZNF185O15231 689 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 ZBTB24O43167 697 aaPredicted RBP12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 RNF8O76064 485 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 ALDH1A2O94788 518 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 KRT1P04264 644 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 HNRNPLP14866 589 aaKnown RBP eCLIP12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 CTNNA2P26232 953 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 CTNNA1P35221 906 aaKnown RBP12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 RDXP35241 583 aaKnown RBP12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 KIR2DL1P43626 348 aaPredicted RBP12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 RPS6KA1Q15418 735 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 ZC3H12AQ5D1E8 599 aaKnown RBP12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 KCNT1Q5JUK3 1230 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 PIK3R6Q5UE93 754 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 SND1Q7KZF4 910 aaKnown RBP eCLIP12.09□□□□□ -0.478e-12■■■■■ 35.6
TUBA1C-203ENST00000548470 ANKS1BQ7Z6G8 1248 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 WDR5BQ86VZ2 330 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 C12orf40Q86WS4 652 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 WFIKKN2Q8TEU8 576 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 COG1Q8WTW3 980 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 HSPH1Q92598 858 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 EZH1Q92800 747 aaPredicted RBP12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 RNF34Q969K3 372 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 FCRL2Q96LA5 508 aaPredicted RBP12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 SNRNP25Q9BV90 132 aaKnown RBP12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 USP18Q9UMW8 372 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 JRKLQ9Y4A0 524 aa12.09□□□□□ -0.47
TUBA1C-203ENST00000548470 KCNU1A8MYU2 1149 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 KCNK3O14649 394 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 PRPSAP2O60256 369 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 ENDOD1O94919 500 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 APBB3O95704 486 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 MOCS2O96007 188 aaPredicted RBP12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 LMNAP02545 664 aaKnown RBP12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 RARAP10276 462 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 SLC1A1P43005 524 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 OXCT1P55809 520 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 DMC1Q14565 340 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 C2orf27AQ580R0 203 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 BRMS1LQ5PSV4 323 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 DNTTIP2Q5QJE6 756 aaKnown RBP12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 TTC39BQ5VTQ0 682 aaPredicted RBP12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 RNF43Q68DV7 783 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 NAIF1Q69YI7 327 aaPredicted RBP12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 STRADAQ7RTN6 431 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 C11orf74Q86VG3 221 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 RHOT1Q8IXI2 618 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 PYROXD2Q8N2H3 581 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 IL17RCQ8NAC3 791 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 HJURPQ8NCD3 748 aaPredicted RBP12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 RAPGEF5Q92565 580 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 CAPZA3Q96KX2 299 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 CALR3Q96L12 384 aaKnown RBP12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 HERPUD2Q9BSE4 406 aa12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 POLMQ9NP87 494 aaPredicted RBP12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 XPO7Q9UIA9 1087 aaKnown RBP12.08□□□□□ -0.48
TUBA1C-203ENST00000548470 SNX12Q9UMY4 172 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms