RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 RPGRIP1Q96KN7 1286 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 ASB2Q96Q27 587 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 SLC22A12Q96S37 553 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 CDK5RAP1Q96SZ6 601 aaKnown RBP6.61□□□□□ -1.35
PRKDC-211ENST00000546304 CHP1Q99653 195 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.61□□□□□ -1.35
PRKDC-211ENST00000546304 NACA2Q9H009 215 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 TASP1Q9H6P5 420 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 CCSER2Q9H7U1 834 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 RAD18Q9NS91 495 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.61□□□□□ -1.35
PRKDC-211ENST00000546304 OSER1Q9NX31 292 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 ADAM22Q9P0K1 906 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 EPS15L1Q9UBC2 864 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 ADAMTS1Q9UHI8 967 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 NENFQ9UMX5 172 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 ZFP37Q9Y6Q3 630 aaPredicted RBP6.61□□□□□ -1.35
PRKDC-211ENST00000546304 KIAA1549LQ6ZVL6 1849 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 MYOFQ9NZM1 2061 aa6.61□□□□□ -1.35
PRKDC-211ENST00000546304 MIA3Q5JRA6 1907 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 ZDBF2Q9HCK1 2354 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-211ENST00000546304 MDM4O15151 490 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 RTN2O75298 545 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 GRAP2O75791 330 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 GLI1P08151 1106 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 GSTP1P09211 210 aaKnown RBP6.6□□□□□ -1.35
PRKDC-211ENST00000546304 MYBL1P10243 752 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 MBL2P11226 248 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-211ENST00000546304 RALAP11233 206 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 GZMAP12544 262 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 LAMP2P13473 410 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 RARGP13631 454 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 RRM1P23921 792 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 SLC6A3Q01959 620 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 HTR4Q13639 388 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 TAF5Q15542 800 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 CPSF6Q16630 551 aaKnown RBP eCLIP6.6□□□□□ -1.35
PRKDC-211ENST00000546304 ASTE1Q2TB18 679 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-211ENST00000546304 FAM78AQ5JUQ0 283 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 EFHC1Q5JVL4 640 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 C10orf120Q5SQS8 335 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 BSPRYQ5W0U4 402 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 BTBD8Q5XKL5 378 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 ACAD10Q6JQN1 1059 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 MSANTD2Q6P1R3 559 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 ALKBH5Q6P6C2 394 aaKnown RBP6.6□□□□□ -1.35
PRKDC-211ENST00000546304 KLHDC10Q6PID8 442 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 MTSS1LQ765P7 747 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 SND1Q7KZF4 910 aaKnown RBP eCLIP6.6□□□□□ -1.35
PRKDC-211ENST00000546304 BEND5Q7L4P6 421 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 PDZD3Q86UT5 571 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 TMEM139Q8IV31 216 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 CCDC170Q8IYT3 715 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 MCOLN2Q8IZK6 566 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 CMTM8Q8IZV2 173 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 ARL14EPQ8N8R7 260 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-211ENST00000546304 CCDC112Q8NEF3 446 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 DQX1Q8TE96 717 aaKnown RBP6.6□□□□□ -1.35
PRKDC-211ENST00000546304 RNF139Q8WU17 664 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 SMARCD2Q92925 531 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 MCRS1Q96EZ8 462 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 CCDC42Q96M95 316 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 ZSWIM3Q96MP5 696 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 SLC2A13Q96QE2 648 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 BAG1Q99933 345 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-211ENST00000546304 SLC46A2Q9BY10 475 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 SMOC2Q9H3U7 446 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 CCDC86Q9H6F5 360 aaKnown RBP6.6□□□□□ -1.35
PRKDC-211ENST00000546304 NHEJ1Q9H9Q4 299 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-211ENST00000546304 KIF9Q9HAQ2 790 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 POPDC2Q9HBU9 364 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 METTL5Q9NRN9 209 aaKnown RBP6.6□□□□□ -1.35
PRKDC-211ENST00000546304 ABCC13Q9NSE7 274 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 OLA1Q9NTK5 396 aaKnown RBP6.6□□□□□ -1.35
PRKDC-211ENST00000546304 SPTLC3Q9NUV7 552 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 ASNSD1Q9NWL6 643 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 SMPD4Q9NXE4 827 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 WDR35Q9P2L0 1181 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 PRKAG3Q9UGI9 489 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 CHORDC1Q9UHD1 332 aaPredicted RBP6.6□□□□□ -1.35
PRKDC-211ENST00000546304 RASAL2Q9UJF2 1139 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 NUDT5Q9UKK9 219 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 PPM1HQ9ULR3 514 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 ARHGAP26Q9UNA1 814 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 CPQQ9Y646 472 aa6.6□□□□□ -1.35
PRKDC-211ENST00000546304 TCRBV5S1A1TA0A578 114 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 LOC730098B7Z3J9 87 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 CAPN9O14815 690 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 IRAK2O43187 625 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 MSI1O43347 362 aaKnown RBP6.59□□□□□ -1.35
PRKDC-211ENST00000546304 IPO7O95373 1038 aaKnown RBP6.59□□□□□ -1.35
PRKDC-211ENST00000546304 TBX18O95935 607 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 FTLP02792 175 aaPredicted RBP6.59□□□□□ -1.35
PRKDC-211ENST00000546304 FYNP06241 537 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 NCAM1P13591 858 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 HDCP19113 662 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 ABCB4P21439 1286 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 SSTR4P31391 388 aa6.59□□□□□ -1.35
PRKDC-211ENST00000546304 CYLC1P35663 651 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms