RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 ESRRGP62508 458 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 C1QBPQ07021 282 aaKnown RBP8.07□□□□□ -1.12
UBR1-202ENST00000546274 SELENBP1Q13228 472 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 NRF1Q16656 503 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 SWSAP1Q6NVH7 229 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 RWDD4Q6NW29 188 aaKnown RBP8.07□□□□□ -1.12
UBR1-202ENST00000546274 SETD3Q86TU7 594 aaPredicted RBP8.07□□□□□ -1.12
UBR1-202ENST00000546274 TCP10LQ8TDR4 215 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 ZBTB45Q96K62 511 aaPredicted RBP8.07□□□□□ -1.12
UBR1-202ENST00000546274 WDR83Q9BRX9 315 aaKnown RBP8.07□□□□□ -1.12
UBR1-202ENST00000546274 C17orf80Q9BSJ5 609 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 FOXP3Q9BZS1 431 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 AS3MTQ9HBK9 375 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 ADGRA2Q96PE1 1338 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 C3orf70A6NLC5 250 aaPredicted RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 KPNA4O00629 521 aaPredicted RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 BANF1O75531 89 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 DLDP09622 509 aaKnown RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 PSMC3P17980 439 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 TNNI1P19237 187 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 BGNP21810 368 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 ARSEP51690 589 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 GPX6P59796 221 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 BASP1P80723 227 aaKnown RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 PRKCEQ02156 737 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 GAD2Q05329 585 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 TRAF2Q12933 501 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 EIF2B5Q13144 721 aaKnown RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 DNASE1L3Q13609 305 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 WDR44Q5JSH3 913 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 ZNF618Q5T7W0 954 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 LIN9Q5TKA1 542 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 GPR107Q5VW38 600 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 GALNT18Q6P9A2 607 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 TRIM72Q6ZMU5 477 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 PRR23BQ6ZRT6 265 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 GSTA5Q7RTV2 222 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 HEATR4Q86WZ0 1026 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 ZNF276Q8N554 614 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 OR5B17Q8NGF7 314 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 HCAR2Q8TDS4 363 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 GIPC2Q8TF65 315 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 GPRASP2Q96D09 838 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 CFAP57Q96MR6 1250 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 TEPSINQ96N21 525 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 FERD3LQ96RJ6 166 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 UCKL1Q9NWZ5 548 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 CRNNQ9UBG3 495 aaPredicted RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 ERGIC3Q9Y282 383 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 PCDHB4Q9Y5E5 795 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 F8VP50 259 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 H3BUI4 141 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 VWA5AO00534 786 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 WNT10BO00744 389 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 CLOCKO15516 846 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 PROCP04070 461 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 CAPN1P07384 714 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 NR3C2P08235 984 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 ETV3P41162 512 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 MLLT3P42568 568 aaPredicted RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 EIF3EP60228 445 aaKnown RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 CTBSQ01459 385 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 PEX6Q13608 980 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 BAATQ14032 418 aaPredicted RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 KRT80Q6KB66 452 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 ABHD15Q6UXT9 468 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 GPR180Q86V85 440 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 RCOR2Q8IZ40 523 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 ELMOD2Q8IZ81 293 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 MCPH1Q8NEM0 835 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 ACSF2Q96CM8 615 aaPredicted RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 UNKQ9C0B0 810 aaKnown RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 PARVAQ9NVD7 372 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 THAP1Q9NVV9 213 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 SEPT9Q9UHD8 586 aaPredicted RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 GNPTGQ9UJJ9 305 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 SOX13Q9UN79 622 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 UTRNP46939 3433 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 hCG_1818297A0A087WSY0 165 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 ALOX15BO15296 676 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 PIGRP01833 764 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 EIF2S1P05198 315 aaKnown RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 ZNF182P17025 639 aaPredicted RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 GRK2P25098 689 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 PTPN7P35236 360 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 MSX2P35548 267 aaPredicted RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 LIG4P49917 911 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 PHC1P78364 1004 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 GPS1Q13098 491 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 SUZ12Q15022 739 aaKnown RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 RARS2Q5T160 578 aaKnown RBP8.06□□□□□ -1.12
UBR1-202ENST00000546274 C9orf131Q5VYM1 1079 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 SPOCD1Q6ZMY3 1216 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 PQLC1Q8N2U9 271 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.06□□□□□ -1.12
UBR1-202ENST00000546274 C7orf57Q8NEG2 295 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 MZB1Q8WU39 189 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 ZNF606Q8WXB4 792 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 FEM1CQ96JP0 617 aa8.06□□□□□ -1.12
UBR1-202ENST00000546274 COPS7BQ9H9Q2 264 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms