RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 CA9Q16790 459 aa21.09■□□□□ 0.97
HMGA2-211ENST00000545998 BOLA3Q53S33 107 aa21.09■□□□□ 0.97
HMGA2-211ENST00000545998 TMEM215Q68D42 235 aa21.09■□□□□ 0.97
HMGA2-211ENST00000545998 CXorf57Q6NSI4 855 aaKnown RBP21.09■□□□□ 0.97
HMGA2-211ENST00000545998 CCDC26Q8TAB7 109 aa21.09■□□□□ 0.97
HMGA2-211ENST00000545998 TBC1D31Q96DN5 1066 aa21.09■□□□□ 0.97
HMGA2-211ENST00000545998 DHX35Q9H5Z1 703 aaKnown RBP21.09■□□□□ 0.97
HMGA2-211ENST00000545998 ZNF212Q9UDV6 495 aa21.09■□□□□ 0.97
HMGA2-211ENST00000545998 SALL4Q9UJQ4 1053 aa21.09■□□□□ 0.97
HMGA2-211ENST00000545998 HCN2Q9UL51 889 aa21.09■□□□□ 0.97
HMGA2-211ENST00000545998 DMDP11532 3685 aa21.09■□□□□ 0.97
HMGA2-211ENST00000545998 CHD5Q8TDI0 1954 aa21.08■□□□□ 0.97
HMGA2-211ENST00000545998 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.08■□□□□ 0.97
HMGA2-211ENST00000545998 TMEM110-MUSTN1A8MSY1 372 aa21.08■□□□□ 0.97
HMGA2-211ENST00000545998 HOXC13P31276 330 aa21.08■□□□□ 0.97
HMGA2-211ENST00000545998 NOP2P46087 812 aaKnown RBP21.08■□□□□ 0.97
HMGA2-211ENST00000545998 ZNF177Q13360 481 aaPredicted RBP21.08■□□□□ 0.97
HMGA2-211ENST00000545998 KCNT1Q5JUK3 1230 aa21.08■□□□□ 0.97
HMGA2-211ENST00000545998 EMC10Q5UCC4 262 aa21.08■□□□□ 0.97
HMGA2-211ENST00000545998 TXNRD3NBQ6F5E7 133 aa21.08■□□□□ 0.97
HMGA2-211ENST00000545998 WFIKKN2Q8TEU8 576 aa21.08■□□□□ 0.97
HMGA2-211ENST00000545998 USP33Q8TEY7 942 aa21.08■□□□□ 0.97
HMGA2-211ENST00000545998 TEKT4Q8WW24 435 aa21.08■□□□□ 0.97
HMGA2-211ENST00000545998 EPAS1Q99814 870 aa21.08■□□□□ 0.97
HMGA2-211ENST00000545998 IER2Q9BTL4 223 aa21.08■□□□□ 0.97
HMGA2-211ENST00000545998 ZWILCHQ9H900 591 aa21.08■□□□□ 0.97
HMGA2-211ENST00000545998 TBC1D30Q9Y2I9 924 aa21.08■□□□□ 0.97
HMGA2-211ENST00000545998 ADGRG1Q9Y653 693 aa21.08■□□□□ 0.97
HMGA2-211ENST00000545998 DUSP10Q9Y6W6 482 aa21.08■□□□□ 0.97
HMGA2-211ENST00000545998 MRPS21P82921 87 aaKnown RBP21.07■□□□□ 0.96
HMGA2-211ENST00000545998 MTAPQ13126 283 aa21.07■□□□□ 0.96
HMGA2-211ENST00000545998 HADHQ16836 314 aaKnown RBP21.07■□□□□ 0.96
HMGA2-211ENST00000545998 SMTNL2Q2TAL5 461 aa21.07■□□□□ 0.96
HMGA2-211ENST00000545998 RWDD4Q6NW29 188 aaKnown RBP21.07■□□□□ 0.96
HMGA2-211ENST00000545998 PKN3Q6P5Z2 889 aa21.07■□□□□ 0.96
HMGA2-211ENST00000545998 TFAP2DQ7Z6R9 452 aa21.07■□□□□ 0.96
HMGA2-211ENST00000545998 KIAA1328Q86T90 577 aa21.07■□□□□ 0.96
HMGA2-211ENST00000545998 ADIPOR2Q86V24 386 aa21.07■□□□□ 0.96
HMGA2-211ENST00000545998 NLRP14Q86W24 1093 aa21.07■□□□□ 0.96
HMGA2-211ENST00000545998 AHI1Q8N157 1196 aa21.07■□□□□ 0.96
HMGA2-211ENST00000545998 KCNV2Q8TDN2 545 aa21.07■□□□□ 0.96
HMGA2-211ENST00000545998 KCTD15Q96SI1 283 aaPredicted RBP21.07■□□□□ 0.96
HMGA2-211ENST00000545998 RETREG1Q9H6L5 497 aa21.07■□□□□ 0.96
HMGA2-211ENST00000545998 KIAA1522Q9P206 1035 aaPredicted RBP21.07■□□□□ 0.96
HMGA2-211ENST00000545998 INTS6Q9UL03 887 aaKnown RBP21.07■□□□□ 0.96
HMGA2-211ENST00000545998 CHURC1-FNTBB4DL54 471 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 CREB3O43889 395 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 RARAP10276 462 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 HTR7P34969 479 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 SSR1P43307 286 aaKnown RBP21.06■□□□□ 0.96
HMGA2-211ENST00000545998 TAS2R40P59535 323 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 SLC12A1Q13621 1099 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 EIF4HQ15056 248 aaKnown RBP21.06■□□□□ 0.96
HMGA2-211ENST00000545998 DPYSL2Q16555 572 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 FUT11Q495W5 492 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 C2orf27AQ580R0 203 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 TXLNBQ8N3L3 684 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 DTWD2Q8NBA8 298 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 OR52K2Q8NGK3 314 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 RPLP0P6Q8NHW5 317 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 ELOVL2Q9NXB9 296 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 A0A0U1RQJ8 604 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 TIMM44O43615 452 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 BUB1BO60566 1050 aaPredicted RBP21.06■□□□□ 0.96
HMGA2-211ENST00000545998 RHOQP17081 205 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 EPHB2P29323 1055 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 TIE1P35590 1138 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 OXCT1P55809 520 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 MAMSTRQ6ZN01 415 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 SETD3Q86TU7 594 aaPredicted RBP21.06■□□□□ 0.96
HMGA2-211ENST00000545998 SPEM1Q8N4L4 309 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 ZNF513Q8N8E2 541 aaPredicted RBP21.06■□□□□ 0.96
HMGA2-211ENST00000545998 ATRIPQ8WXE1 791 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 HSPH1Q92598 858 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.06■□□□□ 0.96
HMGA2-211ENST00000545998 TMEM248Q9NWD8 314 aa21.06■□□□□ 0.96
HMGA2-211ENST00000545998 VPS13AQ96RL7 3174 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 NRDCO43847 1150 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 HNRNPLP14866 589 aaKnown RBP eCLIP21.05■□□□□ 0.96
HMGA2-211ENST00000545998 MZF1P28698 734 aaPredicted RBP21.05■□□□□ 0.96
HMGA2-211ENST00000545998 OR1E1P30953 314 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 CSKP41240 450 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 SLC1A1P43005 524 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 PLK1P53350 603 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 DMC1Q14565 340 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 PLEKHG6Q3KR16 790 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 PITRM1Q5JRX3 1037 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 EGFLAMQ63HQ2 1017 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 MBLAC2Q68D91 279 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 IL17RCQ8NAC3 791 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 TPCN2Q8NHX9 752 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 TTC17Q96AE7 1141 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 ALG14Q96F25 216 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 CALR3Q96L12 384 aaKnown RBP21.05■□□□□ 0.96
HMGA2-211ENST00000545998 CIPCQ9C0C6 399 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 ZDHHC4Q9NPG8 344 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 C2orf42Q9NWW7 574 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 OR51B4Q9Y5P0 310 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 MYO15AQ9UKN7 3530 aa21.05■□□□□ 0.96
HMGA2-211ENST00000545998 MUC22E2RYF6 1773 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms