RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 SIPA1Q96FS4 1042 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 VCPIP1Q96JH7 1222 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 MKRN2Q9H000 416 aaKnown RBP16.21■□□□□ 0.19
CCDC78-216ENST00000544996 FBRSQ9HAH7 460 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 INTS6Q9UL03 887 aaKnown RBP16.21■□□□□ 0.19
CCDC78-216ENST00000544996 CYP8B1Q9UNU6 501 aa16.21■□□□□ 0.19
CCDC78-216ENST00000544996 GPR179Q6PRD1 2367 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 PRR5-ARHGAP8B1AHC4 643 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 AP5Z1O43299 807 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 SRPRAP08240 638 aaKnown RBP16.2■□□□□ 0.18
CCDC78-216ENST00000544996 DESP17661 470 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 GPD1P21695 349 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 RFC1P35251 1148 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-216ENST00000544996 GGCXP38435 758 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 MPLP40238 635 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 NNMTP40261 264 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 PRKCIP41743 596 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 ARHGAP8P85298 464 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 ECT2LQ008S8 904 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 RPL6Q02878 288 aaKnown RBP16.2■□□□□ 0.18
CCDC78-216ENST00000544996 CAMK2GQ13555 558 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-216ENST00000544996 C5orf22Q49AR2 442 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 DCUN1D2Q6PH85 259 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 STRADAQ7RTN6 431 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 C14orf80Q86SX3 495 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 MCOLN2Q8IZK6 566 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 FRMD1Q8N878 549 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 OR2T3Q8NH03 318 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 JOSD2Q8TAC2 188 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 SYT11Q9BT88 431 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 SLC6A17Q9H1V8 727 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 PARD6AQ9NPB6 346 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 ANLNQ9NQW6 1124 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 MBD1Q9UIS9 605 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-216ENST00000544996 ERVW-1Q9UQF0 538 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 BZW2Q9Y6E2 419 aaKnown RBP16.2■□□□□ 0.18
CCDC78-216ENST00000544996 FAM186AA6NE01 2351 aa16.2■□□□□ 0.18
CCDC78-216ENST00000544996 OTOGLQ3ZCN5 2332 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 BCLAF3A2AJT9 711 aaKnown RBP16.19■□□□□ 0.18
CCDC78-216ENST00000544996 TMCO5BA8MYB1 307 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 SRGAP2O75044 1071 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 NDUFS2O75306 463 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 GJB6O95452 261 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 ZNF806P0C7X5 589 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 GZMAP12544 262 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 SDHBP21912 280 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 PBX1P40424 430 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 PLK1P53350 603 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 COPAP53621 1224 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 NFKBIBQ15653 356 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 C15orf59Q2T9L4 293 aaPredicted RBP16.19■□□□□ 0.18
CCDC78-216ENST00000544996 WDR59Q6PJI9 974 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 LRSAM1Q6UWE0 723 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 PRR23CQ6ZRP0 262 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 CYP2U1Q7Z449 544 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 TMEFF1Q8IYR6 380 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 APCDD1Q8J025 514 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 ZNF366Q8N895 744 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 C12orf50Q8NA57 414 aaPredicted RBP16.19■□□□□ 0.18
CCDC78-216ENST00000544996 FAM172AQ8WUF8 416 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 CPLX3Q8WVH0 158 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 SYN2Q92777 582 aaPredicted RBP16.19■□□□□ 0.18
CCDC78-216ENST00000544996 MCEEQ96PE7 176 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 MUC3BQ9H195 1237 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 VPS45Q9NRW7 570 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 TBC1D30Q9Y2I9 924 aa16.19■□□□□ 0.18
CCDC78-216ENST00000544996 EP300Q09472 2414 aaPredicted RBP16.19■□□□□ 0.18
CCDC78-216ENST00000544996 IGHV1OR15-9A0A0B4J2B8 117 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 DRGXA6NNA5 263 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 E9PAM4 449 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 I6L893 689 aaPredicted RBP16.18■□□□□ 0.18
CCDC78-216ENST00000544996 CBFA2T2O43439 604 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 SKILP12757 684 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 RRM1P23921 792 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 MZF1P28698 734 aaPredicted RBP16.18■□□□□ 0.18
CCDC78-216ENST00000544996 CD6P30203 668 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 OXTRP30559 389 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 ADRA1BP35368 520 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 DPP6P42658 865 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 IRAK1P51617 712 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 ZNF143P52747 638 aaPredicted RBP16.18■□□□□ 0.18
CCDC78-216ENST00000544996 ZBED6P86452 979 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 CCDC6Q16204 474 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 HNRNPA1L2Q32P51 320 aaKnown RBP16.18■□□□□ 0.18
CCDC78-216ENST00000544996 PLA2G2CQ5R387 149 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 SH3PXD2AQ5TCZ1 1133 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 E4F1Q66K89 784 aaPredicted RBP16.18■□□□□ 0.18
CCDC78-216ENST00000544996 CXorf57Q6NSI4 855 aaKnown RBP16.18■□□□□ 0.18
CCDC78-216ENST00000544996 ZNF571Q7Z3V5 609 aaPredicted RBP16.18■□□□□ 0.18
CCDC78-216ENST00000544996 SETD3Q86TU7 594 aaPredicted RBP16.18■□□□□ 0.18
CCDC78-216ENST00000544996 VPS36Q86VN1 386 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 CENPIQ92674 756 aaPredicted RBP16.18■□□□□ 0.18
CCDC78-216ENST00000544996 FEM1AQ9BSK4 669 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 PRSS16Q9NQE7 514 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 ITM2CQ9NQX7 267 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 TMPRSS4Q9NRS4 437 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 PARVAQ9NVD7 372 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 TAS2R14Q9NYV8 317 aa16.18■□□□□ 0.18
CCDC78-216ENST00000544996 VPS28Q9UK41 221 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms