RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 NR1H3Q13133 447 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 DPYSQ14117 519 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 ALFQ53S48 1182 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 PPP6R3Q5H9R7 873 aaPredicted RBP13.48□□□□□ -0.25
DDX11-227ENST00000544652 RFX8Q6ZV50 586 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 NYAP1Q6ZVC0 841 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 MAP7D3Q8IWC1 876 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 PARP9Q8IXQ6 854 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 RCOR2Q8IZ40 523 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 CFAP52Q8N1V2 620 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 UBL4BQ8N7F7 174 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 KCTD6Q8NC69 237 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 CSGALNACT1Q8TDX6 532 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 DDI1Q8WTU0 396 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 CSPG4P5Q96PW8 444 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 SLC2A11Q9BYW1 496 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 KLHL11Q9NVR0 708 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 TMEM248Q9NWD8 314 aa13.48□□□□□ -0.25
DDX11-227ENST00000544652 LRRD1A4D1F6 860 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 NEDD8-MDP1E9PL57 170 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 CLDN11O75508 207 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 ZRANB2O95218 330 aaKnown RBP eCLIP13.47□□□□□ -0.25
DDX11-227ENST00000544652 KRT1P04264 644 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 TNNT1P13805 278 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 GLULP15104 373 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 EPHB2P29323 1055 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 ARL4AP40617 200 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 CDKN2BP42772 138 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 COPS2P61201 443 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 MMRN1Q13201 1228 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 KRT81Q14533 505 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 RPS6KA1Q15418 735 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 ANO4Q32M45 955 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 DCAF12L1Q5VU92 463 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 ANKS1BQ7Z6G8 1248 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 ZSCAN30Q86W11 494 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 FIBINQ8TAL6 211 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 MSANTD3Q96H12 275 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 RBM41Q96IZ5 413 aaKnown RBP13.47□□□□□ -0.25
DDX11-227ENST00000544652 LMLNQ96KR4 655 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 CATSPERBQ9H7T0 1116 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 PLK2Q9NYY3 685 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 MPP6Q9NZW5 540 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 EFR3BQ9Y2G0 817 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 TBC1D30Q9Y2I9 924 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 ATG2BQ96BY7 2078 aa13.47□□□□□ -0.25
DDX11-227ENST00000544652 CKAP5Q14008 2032 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 SHISA7A6NL88 538 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 PI4K2BG5E9Z4 385 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 DCLK1O15075 740 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 CISD3P0C7P0 127 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 ERCC2P18074 760 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 PTPN7P35236 360 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 OPRD1P41143 372 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 MAPKAPK2P49137 400 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 GNG11P61952 73 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 PPP2R5EQ16537 467 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 ANKRD20A8PQ5CZ79 823 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 TFDP3Q5H9I0 405 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 ZFYVE27Q5T4F4 411 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 CXorf57Q6NSI4 855 aaKnown RBP13.46□□□□□ -0.25
DDX11-227ENST00000544652 MFSD7Q6UXD7 560 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 TMEM92Q6UXU6 159 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 SPOCD1Q6ZMY3 1216 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 KIAA0907Q7Z7F0 614 aaPredicted RBP13.46□□□□□ -0.25
DDX11-227ENST00000544652 SETD3Q86TU7 594 aaPredicted RBP13.46□□□□□ -0.25
DDX11-227ENST00000544652 C12orf40Q86WS4 652 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 RALGPS2Q86X27 583 aaPredicted RBP13.46□□□□□ -0.25
DDX11-227ENST00000544652 CIR1Q86X95 450 aaPredicted RBP13.46□□□□□ -0.25
DDX11-227ENST00000544652 UBALD2Q8IYN6 164 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 PHTF2Q8N3S3 785 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 RTL3Q8N8U3 475 aaKnown RBP13.46□□□□□ -0.25
DDX11-227ENST00000544652 ZNF557Q8N988 423 aaPredicted RBP13.46□□□□□ -0.25
DDX11-227ENST00000544652 PCDH19Q8TAB3 1148 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 WFDC5Q8TCV5 224 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 RNF157Q96PX1 679 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 XPO6Q96QU8 1125 aaKnown RBP13.46□□□□□ -0.25
DDX11-227ENST00000544652 WDR24Q96S15 920 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 CALN1Q9BXU9 219 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 KLC2Q9H0B6 622 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 CARD9Q9H257 536 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 C8orf33Q9H7E9 229 aaPredicted RBP13.46□□□□□ -0.25
DDX11-227ENST00000544652 PRDM16Q9HAZ2 1276 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 ARHGEF4Q9NR80 690 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 STIM2Q9P246 746 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 WNT16Q9UBV4 365 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 CLEC4EQ9ULY5 219 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 SLC27A6Q9Y2P4 619 aa13.46□□□□□ -0.25
DDX11-227ENST00000544652 A0A0A0MRY4 1105 aa13.45□□□□□ -0.26
DDX11-227ENST00000544652 SPECC1L-ADORA2AF8WAN1 911 aa13.45□□□□□ -0.26
DDX11-227ENST00000544652 FANCGO15287 622 aa13.45□□□□□ -0.26
DDX11-227ENST00000544652 TULP3O75386 442 aa13.45□□□□□ -0.26
DDX11-227ENST00000544652 PYGMP11217 842 aa13.45□□□□□ -0.26
DDX11-227ENST00000544652 AMPD1P23109 780 aa13.45□□□□□ -0.26
DDX11-227ENST00000544652 CTHP32929 405 aa13.45□□□□□ -0.26
DDX11-227ENST00000544652 ETF1P62495 437 aaKnown RBP13.45□□□□□ -0.26
DDX11-227ENST00000544652 AMPD2Q01433 879 aa13.45□□□□□ -0.26
DDX11-227ENST00000544652 FSCBQ5H9T9 825 aa13.45□□□□□ -0.26
DDX11-227ENST00000544652 SLC9A4Q6AI14 798 aa13.45□□□□□ -0.26
DDX11-227ENST00000544652 RWDD4Q6NW29 188 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms