RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 MCF2P10911 925 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 OSBPP22059 807 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 THOP1P52888 689 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 NOMO3P69849 1222 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 PTPN20Q4JDL3 420 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 SLC27A3Q5K4L6 730 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 PPP2R2DQ66LE6 453 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 CIAPIN1Q6FI81 312 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 ELMSAN1Q6PJG2 1045 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 PIWIL2Q8TC59 973 aaKnown RBP13.13□□□□□ -0.31
PDZD4-209ENST00000544474 BSNDQ8WZ55 320 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 EXT2Q93063 718 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 MSTO1Q9BUK6 570 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 KCNK4Q9NYG8 393 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 BAIAP3O94812 1187 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 KCNH1O95259 989 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 PARNO95453 639 aaKnown RBP13.12□□□□□ -0.31
PDZD4-209ENST00000544474 ESRRBO95718 433 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 ERVK-10P10266 1014 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 UGT1A6P19224 532 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 ADORA2AP29274 412 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 RCVRNP35243 200 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 TRAF2Q12933 501 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 BNIP3Q12983 259 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 HSF5Q4G112 596 aaPredicted RBP13.12□□□□□ -0.31
PDZD4-209ENST00000544474 LRRC8EQ6NSJ5 796 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 VASH1Q7L8A9 365 aaPredicted RBP13.12□□□□□ -0.31
PDZD4-209ENST00000544474 HEATR4Q86WZ0 1026 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 C7orf31Q8N865 590 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 NACC2Q96BF6 587 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 PKP2Q99959 881 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 ZNF696Q9H7X3 374 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 SLC38A7Q9NVC3 462 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 WDR27A2RRH5 827 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 TOR1BO14657 336 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 CST3P01034 146 aaPredicted RBP13.12□□□□□ -0.31
PDZD4-209ENST00000544474 LSM3P62310 102 aaKnown RBP13.12□□□□□ -0.31
PDZD4-209ENST00000544474 ESRRGP62508 458 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 CUL2Q13617 745 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 FAM209AQ5JX71 171 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.12□□□□□ -0.31
PDZD4-209ENST00000544474 FAM47BQ8NA70 645 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 ZNF516Q92618 1163 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 MFSD14AQ96MC6 490 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 MTMR12Q9C0I1 747 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.12□□□□□ -0.31
PDZD4-209ENST00000544474 EBF1Q9UH73 591 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 VPS51Q9UID3 782 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 CDC14AQ9UNH5 594 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 AP4E1Q9UPM8 1137 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 PLLPQ9Y342 182 aa13.12□□□□□ -0.31
PDZD4-209ENST00000544474 TPP1O14773 563 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 TCEA1P23193 301 aaKnown RBP13.11□□□□□ -0.31
PDZD4-209ENST00000544474 ARL1P40616 181 aaPredicted RBP13.11□□□□□ -0.31
PDZD4-209ENST00000544474 BCAR1P56945 870 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 MYBPC1Q00872 1141 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 PLCL1Q15111 1095 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 TDRD10Q5VZ19 366 aaKnown RBP13.11□□□□□ -0.31
PDZD4-209ENST00000544474 DHRS4L2Q6PKH6 230 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 FAM160B2Q86V87 743 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 SULF1Q8IWU6 871 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 SLC39A3Q9BRY0 314 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 CCDC68Q9H2F9 335 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 AGO4Q9HCK5 861 aaKnown RBP13.11□□□□□ -0.31
PDZD4-209ENST00000544474 UBP1Q9NZI7 540 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 DRG1Q9Y295 367 aaKnown RBP13.11□□□□□ -0.31
PDZD4-209ENST00000544474 TNRC6CQ9HCJ0 1690 aaKnown RBP13.11□□□□□ -0.31
PDZD4-209ENST00000544474 PLSCR1O15162 318 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 TPPPO94811 219 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 MZF1P28698 734 aaPredicted RBP13.11□□□□□ -0.31
PDZD4-209ENST00000544474 MYL6P60660 151 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 LRP8Q14114 963 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 ZNF829Q3KNS6 432 aaPredicted RBP13.11□□□□□ -0.31
PDZD4-209ENST00000544474 DACT2Q5SW24 774 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 DNAAF3Q8N9W5 541 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 ANKK1Q8NFD2 765 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 WNK4Q96J92 1243 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 VCPIP1Q96JH7 1222 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 OR52B2Q96RD2 323 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 OMDQ99983 421 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 ST6GALNAC4Q9H4F1 302 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 APOBEC3GQ9HC16 384 aaKnown RBP13.11□□□□□ -0.31
PDZD4-209ENST00000544474 PALMDQ9NP74 551 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 GTSE1Q9NYZ3 720 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 AGO2Q9UKV8 859 aaKnown RBP13.11□□□□□ -0.31
PDZD4-209ENST00000544474 TMX2Q9Y320 296 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 DGKBQ9Y6T7 804 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 ATP6AP2A0A1C7CYW4 349 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 TNFRSF10AO00220 468 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 NOL3O60936 208 aaKnown RBP13.11□□□□□ -0.31
PDZD4-209ENST00000544474 ATP6AP2O75787 350 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 EIF2S1P05198 315 aaKnown RBP13.11□□□□□ -0.31
PDZD4-209ENST00000544474 SNAPC2Q13487 334 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 KYAT3Q6YP21 454 aaKnown RBP13.11□□□□□ -0.31
PDZD4-209ENST00000544474 RPS27LQ71UM5 84 aaKnown RBP13.11□□□□□ -0.31
PDZD4-209ENST00000544474 C4orf19Q8IY42 314 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 PNPLA1Q8N8W4 532 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 CMTM5Q96DZ9 223 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 CCDC138Q96M89 665 aa13.11□□□□□ -0.31
PDZD4-209ENST00000544474 NOL11Q9H8H0 719 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms