RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SLC7A9P82251 487 aa31.28■■■□□ 2.6
CCM2-219ENST00000544363 AP1B1Q10567 949 aa31.28■■■□□ 2.6
CCM2-219ENST00000544363 SHKBP1Q8TBC3 707 aa31.28■■■□□ 2.6
CCM2-219ENST00000544363 ADAM7Q9H2U9 754 aa31.28■■■□□ 2.6
CCM2-219ENST00000544363 TMEM248Q9NWD8 314 aa31.28■■■□□ 2.6
CCM2-219ENST00000544363 TPX2Q9ULW0 747 aaKnown RBP31.28■■■□□ 2.6
CCM2-219ENST00000544363 SPDYE4A6NLX3 237 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 ZNF189O75820 626 aaPredicted RBP31.27■■■□□ 2.6
CCM2-219ENST00000544363 SLC6A4P31645 630 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 IRAK1P51617 712 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 C5orf22Q49AR2 442 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 ZNF697Q5TEC3 545 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 TIFAQ96CG3 184 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 HDAC11Q96DB2 347 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 CELF6Q96J87 481 aaKnown RBP31.27■■■□□ 2.6
CCM2-219ENST00000544363 FERMT1Q9BQL6 677 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 NDFIP2Q9NV92 336 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 PAK5Q9P286 719 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 MTRF1LQ9UGC7 380 aaKnown RBP31.27■■■□□ 2.6
CCM2-219ENST00000544363 AGO1Q9UL18 857 aaKnown RBP31.27■■■□□ 2.6
CCM2-219ENST00000544363 DOCK4Q8N1I0 1966 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 CCDC195A0A1B0GUA6 201 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 NDC80O14777 642 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 CNTN5O94779 1100 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 CKMP06732 381 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 GARSP41250 739 aaKnown RBP31.27■■■□□ 2.6
CCM2-219ENST00000544363 PPIDQ08752 370 aaKnown RBP31.27■■■□□ 2.6
CCM2-219ENST00000544363 ALFQ53S48 1182 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 RHBDF2Q6PJF5 856 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 ARHGAP12Q8IWW6 846 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 LGI2Q8N0V4 545 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 ADAMTS19Q8TE59 1207 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 TCEAL4Q96EI5 215 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 SLC46A2Q9BY10 475 aa31.27■■■□□ 2.6
CCM2-219ENST00000544363 C5orf60A6NFR6 353 aa31.26■■■□□ 2.59
CCM2-219ENST00000544363 GCATO75600 419 aa31.26■■■□□ 2.59
CCM2-219ENST00000544363 LATS1O95835 1130 aa31.26■■■□□ 2.59
CCM2-219ENST00000544363 DDX6P26196 483 aaKnown RBP eCLIP31.26■■■□□ 2.59
CCM2-219ENST00000544363 STXBP5Q5T5C0 1151 aa31.26■■■□□ 2.59
CCM2-219ENST00000544363 AFMIDQ63HM1 303 aa31.26■■■□□ 2.59
CCM2-219ENST00000544363 HIBCHQ6NVY1 386 aaPredicted RBP31.26■■■□□ 2.59
CCM2-219ENST00000544363 ZNF707Q96C28 371 aaPredicted RBP31.26■■■□□ 2.59
CCM2-219ENST00000544363 MYEOVQ96EZ4 313 aa31.26■■■□□ 2.59
CCM2-219ENST00000544363 P2RY11Q96G91 374 aa31.26■■■□□ 2.59
CCM2-219ENST00000544363 STOML2Q9UJZ1 356 aa31.26■■■□□ 2.59
CCM2-219ENST00000544363 NUP205Q92621 2012 aa31.25■■■□□ 2.59
CCM2-219ENST00000544363 DOCK6Q96HP0 2047 aa31.25■■■□□ 2.59
CCM2-219ENST00000544363 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP31.25■■■□□ 2.59
CCM2-219ENST00000544363 MOSPD3O75425 235 aa31.25■■■□□ 2.59
CCM2-219ENST00000544363 ZXDBP98169 803 aa31.25■■■□□ 2.59
CCM2-219ENST00000544363 ADGRF1Q5T601 910 aa31.25■■■□□ 2.59
CCM2-219ENST00000544363 RFWD3Q6PCD5 774 aa31.25■■■□□ 2.59
CCM2-219ENST00000544363 C4orf22Q6V702 233 aa31.25■■■□□ 2.59
CCM2-219ENST00000544363 HDXQ7Z353 690 aa31.25■■■□□ 2.59
CCM2-219ENST00000544363 PCGF5Q86SE9 256 aa31.25■■■□□ 2.59
CCM2-219ENST00000544363 DDX50Q9BQ39 737 aaKnown RBP31.25■■■□□ 2.59
CCM2-219ENST00000544363 FUT8Q9BYC5 575 aa31.25■■■□□ 2.59
CCM2-219ENST00000544363 RFXAPO00287 272 aa31.24■■■□□ 2.59
CCM2-219ENST00000544363 ARHGAP15Q53QZ3 475 aa31.24■■■□□ 2.59
CCM2-219ENST00000544363 GPR158Q5T848 1215 aa31.24■■■□□ 2.59
CCM2-219ENST00000544363 TFAP2DQ7Z6R9 452 aa31.24■■■□□ 2.59
CCM2-219ENST00000544363 UMODL1-AS1Q8N2C9 162 aa31.24■■■□□ 2.59
CCM2-219ENST00000544363 MRPL38Q96DV4 380 aaKnown RBP31.24■■■□□ 2.59
CCM2-219ENST00000544363 CDCA3Q99618 268 aaPredicted RBP31.24■■■□□ 2.59
CCM2-219ENST00000544363 SLC39A8Q9C0K1 460 aa31.24■■■□□ 2.59
CCM2-219ENST00000544363 ZNF212Q9UDV6 495 aa31.24■■■□□ 2.59
CCM2-219ENST00000544363 GREM1O60565 184 aa31.24■■■□□ 2.59
CCM2-219ENST00000544363 ZNF33AQ06730 810 aa31.24■■■□□ 2.59
CCM2-219ENST00000544363 TEAD2Q15562 447 aa31.24■■■□□ 2.59
CCM2-219ENST00000544363 RNASEH2BQ5TBB1 312 aaKnown RBP31.24■■■□□ 2.59
CCM2-219ENST00000544363 GRASPQ7Z6J2 395 aaPredicted RBP31.24■■■□□ 2.59
CCM2-219ENST00000544363 CCDC110Q8TBZ0 833 aa31.24■■■□□ 2.59
CCM2-219ENST00000544363 RETREG1Q9H6L5 497 aa31.24■■■□□ 2.59
CCM2-219ENST00000544363 SOBPA7XYQ1 873 aa31.23■■■□□ 2.59
CCM2-219ENST00000544363 DFFAO00273 331 aa31.23■■■□□ 2.59
CCM2-219ENST00000544363 ATP8B1O43520 1251 aa31.23■■■□□ 2.59
CCM2-219ENST00000544363 STK10O94804 968 aaKnown RBP31.23■■■□□ 2.59
CCM2-219ENST00000544363 NDST2P52849 883 aa31.23■■■□□ 2.59
CCM2-219ENST00000544363 KCNC3Q14003 757 aa31.23■■■□□ 2.59
CCM2-219ENST00000544363 CASP8Q14790 479 aa31.23■■■□□ 2.59
CCM2-219ENST00000544363 MORF4L2Q15014 288 aa31.23■■■□□ 2.59
CCM2-219ENST00000544363 SLC5A9Q2M3M2 681 aa31.23■■■□□ 2.59
CCM2-219ENST00000544363 PRSS36Q5K4E3 855 aa31.23■■■□□ 2.59
CCM2-219ENST00000544363 RABGAP1LQ5R372 815 aa31.23■■■□□ 2.59
CCM2-219ENST00000544363 Q6ZNB5 142 aa31.23■■■□□ 2.59
CCM2-219ENST00000544363 A0A0A0MRY4 1105 aa31.22■■■□□ 2.59
CCM2-219ENST00000544363 PAPLNO95428 1278 aa31.22■■■□□ 2.59
CCM2-219ENST00000544363 NTHL1P78549 312 aa31.22■■■□□ 2.59
CCM2-219ENST00000544363 CIR1Q86X95 450 aaPredicted RBP31.22■■■□□ 2.59
CCM2-219ENST00000544363 CCDC13Q8IYE1 715 aa31.22■■■□□ 2.59
CCM2-219ENST00000544363 MREGQ8N565 214 aa31.22■■■□□ 2.59
CCM2-219ENST00000544363 DEPDC1BQ8WUY9 529 aa31.22■■■□□ 2.59
CCM2-219ENST00000544363 SPATA13Q96N96 652 aa31.22■■■□□ 2.59
CCM2-219ENST00000544363 TSGA13Q96PP4 275 aa31.22■■■□□ 2.59
CCM2-219ENST00000544363 TASP1Q9H6P5 420 aa31.22■■■□□ 2.59
CCM2-219ENST00000544363 NOL6Q9H6R4 1146 aaKnown RBP31.22■■■□□ 2.59
CCM2-219ENST00000544363 LSM7Q9UK45 103 aaKnown RBP31.22■■■□□ 2.59
CCM2-219ENST00000544363 FARP1Q9Y4F1 1045 aaPredicted RBP31.22■■■□□ 2.59
CCM2-219ENST00000544363 NOTCH4Q99466 2003 aa31.22■■■□□ 2.59
CCM2-219ENST00000544363 RNF103O00237 685 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms