RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 ARHGEF4Q9NR80 690 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 TMEM248Q9NWD8 314 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 NYNRINQ9P2P1 1898 aaKnown RBP12.24□□□□□ -0.45
DDB1-223ENST00000543658 LIMD1Q9UGP4 676 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 EFR3BQ9Y2G0 817 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 SZT2Q5T011 3432 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 C3orf70A6NLC5 250 aaPredicted RBP12.23□□□□□ -0.45
DDB1-223ENST00000543658 DRGXA6NNA5 263 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 LUC7L3O95232 432 aaKnown RBP12.23□□□□□ -0.45
DDB1-223ENST00000543658 FGGP02679 453 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 CYP17A1P05093 508 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 KRT10P13645 584 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 TYRP14679 529 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 TGM2P21980 687 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 ETFBP38117 255 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 OXCT1P55809 520 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 AMPD2Q01433 879 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 RUNX3Q13761 415 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 DPYSQ14117 519 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 DHCR24Q15392 516 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 C5orf22Q49AR2 442 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 AADACL2Q6P093 401 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 SLC13A5Q86YT5 568 aaPredicted RBP12.23□□□□□ -0.45
DDB1-223ENST00000543658 ADHFE1Q8IWW8 467 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 LZTR1Q8N653 840 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 PCDH19Q8TAB3 1148 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 ATXN2LQ8WWM7 1075 aaKnown RBP12.23□□□□□ -0.45
DDB1-223ENST00000543658 TSC1Q92574 1164 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 P3H4Q92791 437 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 EXOC4Q96A65 974 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 PLA2G2FQ9BZM2 168 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 LINC00597Q9H2U6 94 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 ECT2Q9H8V3 914 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 KCNK12Q9HB15 430 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 PLK2Q9NYY3 685 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 RNF14Q9UBS8 474 aa12.23□□□□□ -0.45
DDB1-223ENST00000543658 COL4A3Q01955 1670 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 WASH4PA8MWX3 477 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 APOC4-APOC2K7ER74 178 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 DCLK1O15075 740 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 CNTN5O94779 1100 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 APOC2P02655 101 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 ARSAP15289 507 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 SGSHP51688 502 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 PFKPQ01813 784 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 ITPRIPL2Q3MIP1 535 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 PREPLQ4J6C6 727 aaPredicted RBP12.22□□□□□ -0.45
DDB1-223ENST00000543658 ALFQ53S48 1182 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 NCBP2-AS2Q69YL0 99 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 SLC9A4Q6AI14 798 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 BBS12Q6ZW61 710 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 ADAT2Q7Z6V5 191 aaKnown RBP12.22□□□□□ -0.45
DDB1-223ENST00000543658 SETD3Q86TU7 594 aaPredicted RBP12.22□□□□□ -0.45
DDB1-223ENST00000543658 TMEM25Q86YD3 366 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 ZNF683Q8IZ20 524 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 ADGRG2Q8IZP9 1017 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 RASGEF1CQ8N431 466 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 ACTRT1Q8TDG2 376 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 COG1Q8WTW3 980 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 RSAD2Q8WXG1 361 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 HAUS1Q96CS2 278 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 ASIC4Q96FT7 647 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 LRRC3BQ96PB8 259 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 FERMT1Q9BQL6 677 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 FAM83CQ9BQN1 747 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 MUC3BQ9H195 1237 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 MARK1Q9P0L2 795 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 HEY1Q9Y5J3 304 aa12.22□□□□□ -0.45
DDB1-223ENST00000543658 COL4A2P08572 1712 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 ARHGAP42A6NI28 874 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.21□□□□□ -0.45
DDB1-223ENST00000543658 LOC730098B7Z3J9 87 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 DFFAO00273 331 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 PPP1R12AO14974 1030 aaPredicted RBP12.21□□□□□ -0.45
DDB1-223ENST00000543658 MCF2LO15068 1137 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 ZNF185O15231 689 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 HOXC11O43248 304 aaPredicted RBP12.21□□□□□ -0.45
DDB1-223ENST00000543658 MFSD11O43934 449 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 RAMP2O60895 175 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 PENKP01210 267 aaPredicted RBP12.21□□□□□ -0.45
DDB1-223ENST00000543658 MX2P20592 715 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 IL4RP24394 825 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 HOXD9P28356 352 aaPredicted RBP12.21□□□□□ -0.45
DDB1-223ENST00000543658 IRAK1P51617 712 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 NDST2P52849 883 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 POLD3Q15054 466 aaPredicted RBP12.21□□□□□ -0.45
DDB1-223ENST00000543658 TAZQ16635 292 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 FYB2Q5VWT5 728 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 C1orf228Q6PIY5 440 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 RHBDF2Q6PJF5 856 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 NUDT18Q6ZVK8 323 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 NLRP14Q86W24 1093 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 DNASE1L2Q92874 299 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 MYEOVQ96EZ4 313 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 RPP25Q9BUL9 199 aaKnown RBP12.21□□□□□ -0.45
DDB1-223ENST00000543658 HPS4Q9NQG7 708 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 HOMER3Q9NSC5 361 aa12.21□□□□□ -0.45
DDB1-223ENST00000543658 DNAJC17Q9NVM6 304 aaKnown RBP12.21□□□□□ -0.45
DDB1-223ENST00000543658 KIAA1522Q9P206 1035 aaPredicted RBP12.21□□□□□ -0.45
DDB1-223ENST00000543658 CDC23Q9UJX2 597 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms