RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 XRCC4Q13426 336 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 PSRC1Q6PGN9 363 aaPredicted RBP7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 CCNI2Q6ZMN8 369 aaPredicted RBP7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 CEP68Q76N32 757 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 STRA8Q7Z7C7 330 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 STK32CQ86UX6 486 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 CHAC2Q8WUX2 184 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 RBPJLQ9UBG7 517 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 ACOT9Q9Y305 439 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 DERAQ9Y315 318 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 DUSP10Q9Y6W6 482 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 PDE2AO00408 941 aaPredicted RBP7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 RTCAO00442 366 aaKnown RBP7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 FKBP9O95302 570 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 ICAM3P32942 547 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 ACLYP53396 1101 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 BTKQ06187 659 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 SLC29A2Q14542 456 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 TMEM164Q5U3C3 297 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 CACHD1Q5VU97 1274 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 SDHAF4Q5VUM1 108 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 FKBP9P1Q75LS8 142 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 CTU1Q7Z7A3 348 aaKnown RBP7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 NPAS4Q8IUM7 802 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 SLC9A9Q8IVB4 645 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 ARMC2Q8NEN0 867 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 JPH3Q8WXH2 748 aaPredicted RBP7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 ARNTL2Q8WYA1 636 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 C11orf49Q9H6J7 331 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 ACTR8Q9H981 624 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 ETNK1Q9HBU6 452 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 CACNA2D2Q9NY47 1150 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 EIF3LQ9Y262 564 aaKnown RBP7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 PCDHB9Q9Y5E1 797 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 CNTNAP1P78357 1384 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 RNF103O00237 685 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 IL1BP01584 269 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 RBP1P09455 135 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 SPATA31C1P0DKV0 1188 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 CYP2A7P20853 494 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 GCKP35557 465 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 SARSP49591 514 aaKnown RBP7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 RAB15P59190 212 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 KDSRQ06136 332 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 CDC16Q13042 620 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 FLOT2Q14254 428 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 MLC1Q15049 377 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 ZACNQ401N2 412 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 FAM46CQ5VWP2 391 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 SPATA21Q7Z572 469 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 TMEM110Q86TL2 294 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 METTL3Q86U44 580 aaKnown RBP7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 TRAPPC5Q8IUR0 188 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 MMGT1Q8N4V1 131 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 OR5B17Q8NGF7 314 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 ABHD8Q96I13 439 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 FAR2Q96K12 515 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 PANX3Q96QZ0 392 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 PCDH9Q9HC56 1237 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 ZNF624Q9P2J8 865 aaPredicted RBP7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 PDE4DIPQ5VU43 2346 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 ROBO1Q9Y6N7 1651 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 SMIM28A0A1B0GU29 152 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 SOWAHBA6NEL2 793 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 TBL1XO60907 577 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 TLE2Q04725 743 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 ST3GAL1Q11201 340 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 NT5DC1Q5TFE4 455 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 ANKS6Q68DC2 871 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 LVRNQ6Q4G3 990 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 KCNT2Q6UVM3 1135 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 RGS9BPQ6ZS82 235 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 MTSS1LQ765P7 747 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 TTC7BQ86TV6 843 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 FAM35AQ86V20 835 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 DBF4BQ8NFT6 615 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 OR9Q1Q8NGQ5 310 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 TUBGCP3Q96CW5 907 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 DNAJC19Q96DA6 116 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 KCNF1Q9H3M0 494 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 NPHS2Q9NP85 383 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 ZC4H2Q9NQZ6 224 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 AURKCQ9UQB9 309 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 ZSCAN5CA6NGD5 496 aaPredicted RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 TRPC5OSA6NMA1 111 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 ENO3P13929 434 aaPredicted RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 TPP2P29144 1249 aaPredicted RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 GLRBP48167 497 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 FPGSQ05932 587 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 CNTN1Q12860 1018 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 INPP5AQ14642 412 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 GPR158Q5T848 1215 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 PPP2R2DQ66LE6 453 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 VSTM1Q6UX27 236 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 MON1AQ86VX9 555 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 MAB21L3Q8N8X9 362 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 TDRD5Q8NAT2 981 aaKnown RBP7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 SUN5Q8TC36 379 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 BTN2A2Q8WVV5 523 aa7.03□□□□□ -1.28
SRGAP1-206ENST00000543397 SERAC1Q96JX3 654 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms