RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 CDH4P55283 916 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 DR1Q01658 176 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 LMNB2Q03252 620 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 SLC10A2Q12908 348 aaPredicted RBP10.97□□□□□ -0.65
DDB1-221ENST00000543162 XRCC4Q13426 336 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 DHX34Q14147 1143 aaKnown RBP10.97□□□□□ -0.65
DDB1-221ENST00000543162 PDK1Q15118 436 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 SKIV2LQ15477 1246 aaKnown RBP10.97□□□□□ -0.65
DDB1-221ENST00000543162 HABP4Q5JVS0 413 aaKnown RBP10.97□□□□□ -0.65
DDB1-221ENST00000543162 DARS2Q6PI48 645 aaKnown RBP10.97□□□□□ -0.65
DDB1-221ENST00000543162 MAATS1Q7Z4T9 603 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 ZC3H18Q86VM9 953 aaKnown RBP10.97□□□□□ -0.65
DDB1-221ENST00000543162 NLRP14Q86W24 1093 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 CIR1Q86X95 450 aaPredicted RBP10.97□□□□□ -0.65
DDB1-221ENST00000543162 CCDC33Q8N5R6 958 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 DEFB123Q8N688 67 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 NPWQ8N729 165 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 KIAA1958Q8N8K9 716 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 MYRIPQ8NFW9 859 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 ATL2Q8NHH9 583 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 RIN3Q8TB24 985 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 GRK7Q8WTQ7 553 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 UBXN4Q92575 508 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 TMA16Q96EY4 203 aaKnown RBP10.97□□□□□ -0.65
DDB1-221ENST00000543162 CELF6Q96J87 481 aaKnown RBP10.97□□□□□ -0.65
DDB1-221ENST00000543162 MYADMQ96S97 322 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 POMKQ9H5K3 350 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 TRPV4Q9HBA0 871 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 PCYOX1Q9UHG3 505 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 AMACRQ9UHK6 382 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 DRG1Q9Y295 367 aaKnown RBP10.97□□□□□ -0.65
DDB1-221ENST00000543162 USP15Q9Y4E8 981 aaPredicted RBP10.97□□□□□ -0.65
DDB1-221ENST00000543162 DOCK4Q8N1I0 1966 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 BRWD1Q9NSI6 2320 aa10.97□□□□□ -0.65
DDB1-221ENST00000543162 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.96□□□□□ -0.65
DDB1-221ENST00000543162 A0A1B0GVM2 712 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 TCAF2A6NFQ2 919 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 HACD1B0YJ81 288 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 H3BQ06 376 aaPredicted RBP10.96□□□□□ -0.65
DDB1-221ENST00000543162 GFRA2O00451 464 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 PPP1R12AO14974 1030 aaPredicted RBP10.96□□□□□ -0.65
DDB1-221ENST00000543162 RAD51CO43502 376 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 TBL1XO60907 577 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 ECEL1O95672 775 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 GAS8O95995 478 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 CYBBP04839 570 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 ITGAVP06756 1048 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 RHOXF2BP0C7M4 288 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 KCNA5P22460 613 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 OR1E1P30953 314 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 SGSHP51688 502 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 NDST2P52849 883 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 MRPS25P82663 173 aaKnown RBP10.96□□□□□ -0.65
DDB1-221ENST00000543162 GALNT2Q10471 571 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 ZNF177Q13360 481 aaPredicted RBP10.96□□□□□ -0.65
DDB1-221ENST00000543162 OASLQ15646 514 aaKnown RBP10.96□□□□□ -0.65
DDB1-221ENST00000543162 MPPE1Q53F39 396 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 GLE1Q53GS7 698 aaKnown RBP10.96□□□□□ -0.65
DDB1-221ENST00000543162 SLC45A4Q5BKX6 768 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 CHST9Q7L1S5 443 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 GSTA5Q7RTV2 222 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 CDKL3Q8IVW4 592 aaPredicted RBP10.96□□□□□ -0.65
DDB1-221ENST00000543162 UMODL1-AS1Q8N2C9 162 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 NETO2Q8NC67 525 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 CCNYQ8ND76 341 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 BPIFB1Q8TDL5 484 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 DDI1Q8WTU0 396 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 TFB1MQ8WVM0 346 aaKnown RBP10.96□□□□□ -0.65
DDB1-221ENST00000543162 E2F7Q96AV8 911 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 OTUB2Q96DC9 234 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 RSPRY1Q96DX4 576 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 GUCD1Q96NT3 240 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 OLFM3Q96PB7 478 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 QKIQ96PU8 341 aaKnown RBP eCLIP10.96□□□□□ -0.65
DDB1-221ENST00000543162 RHOXF2Q9BQY4 288 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 TMEM121Q9BTD3 319 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 LRRC1Q9BTT6 524 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 KLC2Q9H0B6 622 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 UBE2ZQ9H832 354 aaPredicted RBP10.96□□□□□ -0.65
DDB1-221ENST00000543162 ZFP14Q9HCL3 533 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 NDFIP2Q9NV92 336 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 OBP2AQ9NY56 170 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 ZNF212Q9UDV6 495 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.96□□□□□ -0.65
DDB1-221ENST00000543162 WNT6Q9Y6F9 365 aa10.96□□□□□ -0.65
DDB1-221ENST00000543162 V9GYY5 206 aaPredicted RBP10.96□□□□□ -0.65
DDB1-221ENST00000543162 CDH23Q9H251 3354 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 BCLAF3A2AJT9 711 aaKnown RBP10.95□□□□□ -0.66
DDB1-221ENST00000543162 CFAP69A5D8W1 941 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 FAM187AA6NFU0 413 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 HEPACAM2A8MVW5 462 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 SGK1O00141 431 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 DFFAO00273 331 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 TTI1O43156 1089 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 RAMP2O60895 175 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 ZNF189O75820 626 aaPredicted RBP10.95□□□□□ -0.66
DDB1-221ENST00000543162 LAMP2P13473 410 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 FCARP24071 287 aa10.95□□□□□ -0.66
DDB1-221ENST00000543162 GARSP41250 739 aaKnown RBP10.95□□□□□ -0.66
DDB1-221ENST00000543162 PTGIRP43119 386 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms