RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 WDCPQ9H6R7 721 aa10.12□□□□□ -0.79
SS18-205ENST00000542420 NOD2Q9HC29 1040 aa10.12□□□□□ -0.79
SS18-205ENST00000542420 ABCC13Q9NSE7 274 aa10.12□□□□□ -0.79
SS18-205ENST00000542420 MIOSQ9NXC5 875 aa10.12□□□□□ -0.79
SS18-205ENST00000542420 ZFP69BQ9UJL9 534 aa10.12□□□□□ -0.79
SS18-205ENST00000542420 MID2Q9UJV3 735 aa10.12□□□□□ -0.79
SS18-205ENST00000542420 TLL2Q9Y6L7 1015 aa10.12□□□□□ -0.79
SS18-205ENST00000542420 DOCK4Q8N1I0 1966 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 WASH4PA8MWX3 477 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 FAM155AB1AL88 458 aaPredicted RBP10.11□□□□□ -0.79
SS18-205ENST00000542420 BPGMP07738 259 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 NCAM1P13591 858 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 CCNCP24863 283 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 PSMB4P28070 264 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 NDUFV1P49821 464 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 SCNN1GP51170 649 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 CRHR2Q13324 411 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 TEX44Q53QW1 395 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 WASHC2DQ5SRD0 308 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 NAPEPLDQ6IQ20 393 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 HFE2Q6ZVN8 426 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 TBC1D1Q86TI0 1168 aaPredicted RBP10.11□□□□□ -0.79
SS18-205ENST00000542420 ZNF598Q86UK7 904 aaKnown RBP10.11□□□□□ -0.79
SS18-205ENST00000542420 TAB3Q8N5C8 712 aaPredicted RBP10.11□□□□□ -0.79
SS18-205ENST00000542420 STKLD1Q8NE28 680 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 ARMC2Q8NEN0 867 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 MICAL1Q8TDZ2 1067 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 FUBP3Q96I24 572 aaKnown RBP eCLIP10.11□□□□□ -0.793e-6■□□□□ 10.3
SS18-205ENST00000542420 SH3GL3Q99963 347 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 IL22Q9GZX6 179 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 MRM3Q9HC36 420 aaKnown RBP10.11□□□□□ -0.79
SS18-205ENST00000542420 COMMD8Q9NX08 183 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 DDIT4Q9NX09 232 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 KLHL8Q9P2G9 620 aaPredicted RBP10.11□□□□□ -0.79
SS18-205ENST00000542420 PADI3Q9ULW8 664 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 CREB3O43889 395 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 H2AFYO75367 372 aaKnown RBP10.11□□□□□ -0.79
SS18-205ENST00000542420 SKAP2O75563 359 aaPredicted RBP10.11□□□□□ -0.79
SS18-205ENST00000542420 MPOP05164 745 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 DLDP09622 509 aaKnown RBP10.11□□□□□ -0.79
SS18-205ENST00000542420 SRGAP2BP0DMP2 458 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 GRK2P25098 689 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 CLNS1AP54105 237 aaKnown RBP10.11□□□□□ -0.79
SS18-205ENST00000542420 PRKAA2P54646 552 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 OCRLQ01968 901 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 NME3Q13232 169 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 TRIM71Q2Q1W2 868 aaKnown RBP10.11□□□□□ -0.79
SS18-205ENST00000542420 CCDC153Q494R4 210 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 AP1ARQ63HQ0 302 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 CXCL17Q6UXB2 119 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 KIRREL3Q8IZU9 778 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 ARHGAP18Q8N392 663 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 PDCD7Q8N8D1 485 aaKnown RBP10.11□□□□□ -0.79
SS18-205ENST00000542420 C3orf58Q8NDZ4 430 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 TRIB2Q92519 343 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 SPOCK2Q92563 424 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 CERS2Q96G23 380 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 WWP1Q9H0M0 922 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 MMADHCQ9H3L0 296 aaPredicted RBP10.11□□□□□ -0.79
SS18-205ENST00000542420 SMOC2Q9H3U7 446 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 CATSPERBQ9H7T0 1116 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 NPHS2Q9NP85 383 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 THAP1Q9NVV9 213 aa10.11□□□□□ -0.79
SS18-205ENST00000542420 AAR2Q9Y312 384 aaKnown RBP10.11□□□□□ -0.79
SS18-205ENST00000542420 WDR27A2RRH5 827 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 HMX2A2RU54 273 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 TTC36A6NLP5 189 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 IRAK2O43187 625 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 CCDC22O60826 627 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 HAUS5O94927 633 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 LMNAP02545 664 aaKnown RBP10.1□□□□□ -0.79
SS18-205ENST00000542420 MYL4P12829 197 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 EZRP15311 586 aaKnown RBP10.1□□□□□ -0.79
SS18-205ENST00000542420 SPRP35270 261 aaPredicted RBP10.1□□□□□ -0.79
SS18-205ENST00000542420 HK2P52789 917 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 PITX1P78337 314 aaPredicted RBP10.1□□□□□ -0.79
SS18-205ENST00000542420 CTC1Q2NKJ3 1217 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 MANEALQ5VSG8 457 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 TIGD7Q6NT04 549 aaPredicted RBP10.1□□□□□ -0.79
SS18-205ENST00000542420 TRMT10BQ6PF06 316 aaKnown RBP10.1□□□□□ -0.79
SS18-205ENST00000542420 CD300LGQ6UXG3 332 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 PID1Q7Z2X4 250 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 CLNKQ7Z7G1 428 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 NDUFAF2Q8N183 169 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 MPP5Q8N3R9 675 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 CCNYQ8ND76 341 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 TEKT5Q96M29 485 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 FAM210AQ96ND0 272 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 KCNK13Q9HB14 408 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 XPNPEP3Q9NQH7 507 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 KANSL3Q9P2N6 904 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 RPS6KL1Q9Y6S9 549 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 GOLGA8RI6L899 631 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 TIMM44O43615 452 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 APOA4P06727 396 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 USP17L7P0C7H9 530 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 NEFHP12036 1026 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 CALB2P22676 271 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 MGAT1P26572 445 aa10.1□□□□□ -0.79
SS18-205ENST00000542420 SERPINB8P50452 374 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms