RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 FAM102AQ5T9C2 384 aaPredicted RBP16.94■□□□□ 0.3
CCND1-205ENST00000542367 N4BP2L1Q5TBK1 243 aaPredicted RBP16.94■□□□□ 0.3
CCND1-205ENST00000542367 TTC39BQ5VTQ0 682 aaPredicted RBP16.94■□□□□ 0.3
CCND1-205ENST00000542367 DCAF12L1Q5VU92 463 aa16.94■□□□□ 0.3
CCND1-205ENST00000542367 OTUD1Q5VV17 481 aaPredicted RBP16.94■□□□□ 0.3
CCND1-205ENST00000542367 NAA35Q5VZE5 725 aa16.94■□□□□ 0.3
CCND1-205ENST00000542367 ANKRD20A12PQ8NF67 263 aa16.94■□□□□ 0.3
CCND1-205ENST00000542367 DNASE2BQ8WZ79 361 aa16.94■□□□□ 0.3
CCND1-205ENST00000542367 IGSF8Q969P0 613 aa16.94■□□□□ 0.3
CCND1-205ENST00000542367 GTPBP2Q9BX10 602 aaKnown RBP16.94■□□□□ 0.3
CCND1-205ENST00000542367 WDCPQ9H6R7 721 aa16.94■□□□□ 0.3
CCND1-205ENST00000542367 PIGVQ9NUD9 493 aa16.94■□□□□ 0.3
CCND1-205ENST00000542367 LIMA1Q9UHB6 759 aaKnown RBP16.94■□□□□ 0.3
CCND1-205ENST00000542367 SLCO3A1Q9UIG8 710 aa16.94■□□□□ 0.3
CCND1-205ENST00000542367 VANGL2Q9ULK5 521 aa16.94■□□□□ 0.3
CCND1-205ENST00000542367 STAP1Q9ULZ2 295 aa16.94■□□□□ 0.3
CCND1-205ENST00000542367 SIK3Q9Y2K2 1263 aa16.94■□□□□ 0.3
CCND1-205ENST00000542367 HS3ST4Q9Y661 456 aa16.94■□□□□ 0.3
CCND1-205ENST00000542367 A0A1B0GVM2 712 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 TCAF2A6NFQ2 919 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 METTL12A8MUP2 240 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 TTC34A8MYJ7 566 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 GOLGA8SH3BPF8 625 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 ARHGAP33O14559 1287 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 SIN3BO75182 1162 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 ADCY5O95622 1261 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 DNTTP04053 509 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 PDGFRAP16234 1089 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 CDK11BP21127 795 aaKnown RBP16.93■□□□□ 0.3
CCND1-205ENST00000542367 MZF1P28698 734 aaPredicted RBP16.93■□□□□ 0.3
CCND1-205ENST00000542367 ACSL1P33121 698 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 SOX5P35711 763 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 SCNN1AP37088 669 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 GGCXP38435 758 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 CXCR3P49682 368 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 SULT1E1P49888 294 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 JAM2P57087 298 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 NOMO3P69849 1222 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 CENPCQ03188 943 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 ZBTB16Q05516 673 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 SLC12A1Q13621 1099 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 HNRNPA1L2Q32P51 320 aaKnown RBP16.93■□□□□ 0.3
CCND1-205ENST00000542367 SH3PXD2AQ5TCZ1 1133 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 PSAPL1Q6NUJ1 521 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 C14orf80Q86SX3 495 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 ZNF677Q86XU0 584 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 DHX40Q8IX18 779 aaKnown RBP16.93■□□□□ 0.3
CCND1-205ENST00000542367 KDM1BQ8NB78 822 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 MSANTD4Q8NCY6 345 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 SLC20A1Q8WUM9 679 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 NT5C3BQ969T7 300 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 RPL10LQ96L21 214 aaKnown RBP16.93■□□□□ 0.3
CCND1-205ENST00000542367 PCMTD1Q96MG8 357 aaPredicted RBP16.93■□□□□ 0.3
CCND1-205ENST00000542367 TBCBQ99426 244 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 TKTL2Q9H0I9 626 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 SIK2Q9H0K1 926 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 MIR1-1HGQ9H1L0 117 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 RSPH9Q9H1X1 276 aaPredicted RBP16.93■□□□□ 0.3
CCND1-205ENST00000542367 SUSD2Q9UGT4 822 aa16.93■□□□□ 0.3
CCND1-205ENST00000542367 NOCTQ9UK39 431 aaKnown RBP16.93■□□□□ 0.3
CCND1-205ENST00000542367 GIPC1O14908 333 aa16.92■□□□□ 0.3
CCND1-205ENST00000542367 F9P00740 461 aa16.92■□□□□ 0.3
CCND1-205ENST00000542367 SYPP08247 313 aa16.92■□□□□ 0.3
CCND1-205ENST00000542367 CHRNB2P17787 502 aa16.92■□□□□ 0.3
CCND1-205ENST00000542367 NOVA1P51513 510 aaKnown RBP16.92■□□□□ 0.3
CCND1-205ENST00000542367 IRAK1P51617 712 aa16.92■□□□□ 0.3
CCND1-205ENST00000542367 CDR2Q01850 454 aa16.92■□□□□ 0.3
CCND1-205ENST00000542367 DEUP1Q05D60 604 aa16.92■□□□□ 0.3
CCND1-205ENST00000542367 ARID5BQ14865 1188 aa16.92■□□□□ 0.3
CCND1-205ENST00000542367 NCAPHQ15003 741 aa16.92■□□□□ 0.3
CCND1-205ENST00000542367 SYCP1Q15431 976 aa16.92■□□□□ 0.3
CCND1-205ENST00000542367 SLC25A52Q3SY17 297 aa16.92■□□□□ 0.3
CCND1-205ENST00000542367 C9orf64Q5T6V5 341 aa16.92■□□□□ 0.3
CCND1-205ENST00000542367 RNF219Q5W0B1 726 aaPredicted RBP16.92■□□□□ 0.3
CCND1-205ENST00000542367 ZNF776Q68DI1 518 aaPredicted RBP16.92■□□□□ 0.3
CCND1-205ENST00000542367 CXorf57Q6NSI4 855 aaKnown RBP16.92■□□□□ 0.3
CCND1-205ENST00000542367 SND1Q7KZF4 910 aaKnown RBP eCLIP16.92■□□□□ 0.3
CCND1-205ENST00000542367 PGAP3Q96FM1 320 aaPredicted RBP16.92■□□□□ 0.3
CCND1-205ENST00000542367 SPAG5Q96R06 1193 aa16.92■□□□□ 0.3
CCND1-205ENST00000542367 BTBD1Q9H0C5 482 aa16.92■□□□□ 0.3
CCND1-205ENST00000542367 C6orf106Q9H6K1 298 aaPredicted RBP16.92■□□□□ 0.3
CCND1-205ENST00000542367 ANLNQ9NQW6 1124 aa16.92■□□□□ 0.3
CCND1-205ENST00000542367 ARHGEF38Q9NXL2 777 aa16.92■□□□□ 0.3
CCND1-205ENST00000542367 TMEM63CQ9P1W3 806 aa16.92■□□□□ 0.3
CCND1-205ENST00000542367 EIF2B4Q9UI10 523 aaKnown RBP16.92■□□□□ 0.3
CCND1-205ENST00000542367 ASCC3Q8N3C0 2202 aaKnown RBP16.92■□□□□ 0.3
CCND1-205ENST00000542367 NUMA1Q14980 2115 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.91■□□□□ 0.3
CCND1-205ENST00000542367 A0A1B0GTW7 788 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 TARSL2A2RTX5 802 aaKnown RBP16.91■□□□□ 0.3
CCND1-205ENST00000542367 LRRC10BA6NIK2 292 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 LGALS16A8MUM7 142 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 ZNF18P17022 549 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 CSRP1P21291 193 aaKnown RBP16.91■□□□□ 0.3
CCND1-205ENST00000542367 FLT3P36888 993 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 STAT1P42224 750 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 STK19P49842 368 aaPredicted RBP16.91■□□□□ 0.3
CCND1-205ENST00000542367 PLK1P53350 603 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 OXCT1P55809 520 aa16.91■□□□□ 0.3
CCND1-205ENST00000542367 FMO1Q01740 532 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms