RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 DNMT3BQ9UBC3 853 aaKnown RBP5.67□□□□□ -1.5
CIT-211ENST00000541841 CFDP1Q9UEE9 299 aaPredicted RBP5.67□□□□□ -1.5
CIT-211ENST00000541841 OR2W5A6NFC9 320 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 AQP7P3A6NL99 342 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 DHHO43323 396 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 TAF5LO75529 589 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 PDE8BO95263 885 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 F9P00740 461 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 YY1P25490 414 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 EPHB2P29323 1055 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 SLC5A2P31639 672 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 VIPR2P41587 438 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 PDE1AP54750 535 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 WNT3P56703 355 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 LOXL3P58215 753 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 RPP30P78346 268 aaKnown RBP5.66□□□□□ -1.5
CIT-211ENST00000541841 CREB5Q02930 508 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 CDC16Q13042 620 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 SUPT20HL1Q3ZLR7 823 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 CEP78Q5JTW2 689 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 FAM47EQ6ZV65 393 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 RASGRP2Q7LDG7 609 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 YTHDF3Q7Z739 585 aaKnown RBP5.66□□□□□ -1.5
CIT-211ENST00000541841 DTX2Q86UW9 622 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 GAS2L3Q86XJ1 694 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 DIS3L2Q8IYB7 885 aaKnown RBP5.66□□□□□ -1.5
CIT-211ENST00000541841 LRRC71Q8N4P6 559 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 LINS1Q8NG48 757 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 SMCR8Q8TEV9 937 aaPredicted RBP5.66□□□□□ -1.5
CIT-211ENST00000541841 CPT1BQ92523 772 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 GLG1Q92896 1179 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 MCRS1Q96EZ8 462 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 MECRQ9BV79 373 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 SLC25A18Q9H1K4 315 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 DUSP22Q9NRW4 184 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 ZSCAN32Q9NX65 697 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 NDUFAF4Q9P032 175 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 PSAT1Q9Y617 370 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 CDY1Q9Y6F8 540 aa5.66□□□□□ -1.5
CIT-211ENST00000541841 SMARCA2P51531 1590 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 BICDL2A1A5D9 508 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 H7C0S8 307 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 GTPBP1O00178 669 aaKnown RBP5.65□□□□□ -1.5
CIT-211ENST00000541841 SLC16A3O15427 465 aaKnown RBP5.65□□□□□ -1.5
CIT-211ENST00000541841 CCNT2O60583 730 aaKnown RBP5.65□□□□□ -1.5
CIT-211ENST00000541841 TSPAN3O60637 253 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 JTBO76095 146 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 HSPA4LO95757 839 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 LATS1O95835 1130 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 TFRCP02786 760 aaKnown RBP5.65□□□□□ -1.5
CIT-211ENST00000541841 ATXN1LP0C7T5 689 aaKnown RBP5.65□□□□□ -1.5
CIT-211ENST00000541841 ACSL1P33121 698 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 HADHAP40939 763 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 PAFAH1B1P43034 410 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 HARS2P49590 506 aaKnown RBP5.65□□□□□ -1.5
CIT-211ENST00000541841 NLRP5P59047 1200 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 MC1RQ01726 317 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 KRT17Q04695 432 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 IQCB1Q15051 598 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 ETFDHQ16134 617 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 LRRC24Q50LG9 513 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 TEDDM1Q5T9Z0 273 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 KIAA1614Q5VZ46 1190 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 ANO7Q6IWH7 933 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 RPUSD3Q6P087 351 aaKnown RBP5.65□□□□□ -1.5
CIT-211ENST00000541841 ATF7IPQ6VMQ6 1270 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.65□□□□□ -1.5
CIT-211ENST00000541841 ZSCAN30Q86W11 494 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 ZNF713Q8N859 430 aaPredicted RBP5.65□□□□□ -1.5
CIT-211ENST00000541841 HMGB4Q8WW32 186 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 CUL5Q93034 780 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 PHF7Q9BWX1 381 aaPredicted RBP5.65□□□□□ -1.5
CIT-211ENST00000541841 SIL1Q9H173 461 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 RETREG1Q9H6L5 497 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 ZDHHC7Q9NXF8 308 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 ZNF112Q9UJU3 913 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 NDRG4Q9ULP0 352 aaKnown RBP5.65□□□□□ -1.5
CIT-211ENST00000541841 ZNF711Q9Y462 761 aa5.65□□□□□ -1.5
CIT-211ENST00000541841 HMGXB3Q12766 1538 aa5.64□□□□□ -1.51
CIT-211ENST00000541841 ZSCAN9O15535 394 aaPredicted RBP5.64□□□□□ -1.51
CIT-211ENST00000541841 RGS10O43665 173 aa5.64□□□□□ -1.51
CIT-211ENST00000541841 SRGAP2O75044 1071 aa5.64□□□□□ -1.51
CIT-211ENST00000541841 PGM3O95394 542 aa5.64□□□□□ -1.51
CIT-211ENST00000541841 VNN1O95497 513 aa5.64□□□□□ -1.51
CIT-211ENST00000541841 CER1O95813 267 aa5.64□□□□□ -1.51
CIT-211ENST00000541841 TUBB4AP04350 444 aa5.64□□□□□ -1.51
CIT-211ENST00000541841 CLEC3BP05452 202 aa5.64□□□□□ -1.51
CIT-211ENST00000541841 XRCC6P12956 609 aaKnown RBP eCLIP5.64□□□□□ -1.51
CIT-211ENST00000541841 ALADP13716 330 aa5.64□□□□□ -1.51
CIT-211ENST00000541841 KELP23276 732 aa5.64□□□□□ -1.51
CIT-211ENST00000541841 NTSR1P30989 418 aa5.64□□□□□ -1.51
CIT-211ENST00000541841 CTNNA1P35221 906 aaKnown RBP5.64□□□□□ -1.51
CIT-211ENST00000541841 PSMC2P35998 433 aaKnown RBP5.64□□□□□ -1.51
CIT-211ENST00000541841 ARL3P36405 182 aa5.64□□□□□ -1.51
CIT-211ENST00000541841 SNX16P57768 344 aa5.64□□□□□ -1.51
CIT-211ENST00000541841 SF3A3Q12874 501 aaKnown RBP eCLIP5.64□□□□□ -1.51
CIT-211ENST00000541841 ACVR2BQ13705 512 aa5.64□□□□□ -1.51
CIT-211ENST00000541841 RASA2Q15283 850 aa5.64□□□□□ -1.51
CIT-211ENST00000541841 SEC23BQ15437 767 aa5.64□□□□□ -1.51
CIT-211ENST00000541841 NFIL3Q16649 462 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms