RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 CCDC130P13994 396 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 SLC8A1P32418 973 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 CHKAP35790 457 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 DCTP40126 519 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 TOB1P50616 345 aaPredicted RBP10.16□□□□□ -0.78
CHFR-220ENST00000541817 ZNF75DP51815 510 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 ZNF131P52739 623 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 METAP1P53582 386 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 ADPRHP54922 357 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 POU5F1Q01860 360 aaKnown RBP10.16□□□□□ -0.78
CHFR-220ENST00000541817 SFSWAPQ12872 951 aaKnown RBP10.16□□□□□ -0.78
CHFR-220ENST00000541817 KCNAB2Q13303 367 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 ORC2Q13416 577 aaPredicted RBP10.16□□□□□ -0.78
CHFR-220ENST00000541817 STAT4Q14765 748 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 PERM1Q5SV97 790 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 HYIQ5T013 277 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 MBLAC2Q68D91 279 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.16□□□□□ -0.78
CHFR-220ENST00000541817 RBM44Q6ZP01 1051 aaKnown RBP10.16□□□□□ -0.78
CHFR-220ENST00000541817 ZFAND4Q86XD8 727 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 AADATQ8N5Z0 425 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 LINC00301Q8NCQ3 95 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 WFDC5Q8TCV5 224 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 JPH3Q8WXH2 748 aaPredicted RBP10.16□□□□□ -0.78
CHFR-220ENST00000541817 KLK6Q92876 244 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 MIB2Q96AX9 1013 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 CDK5RAP3Q96JB5 506 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 DMAP1Q9NPF5 467 aaPredicted RBP10.16□□□□□ -0.78
CHFR-220ENST00000541817 KRT82Q9NSB4 513 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 INTS13Q9NVM9 706 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.16□□□□□ -0.78
CHFR-220ENST00000541817 TBC1D7Q9P0N9 293 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 SUN2Q9UH99 717 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 ITPR3Q14573 2671 aa10.16□□□□□ -0.78
CHFR-220ENST00000541817 CCDC187A0A096LP49 1063 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.15□□□□□ -0.78
CHFR-220ENST00000541817 C10orf142B7Z368 130 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 K7ESM1 405 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 PIAS2O75928 621 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 PRPF6O94906 941 aaKnown RBP10.15□□□□□ -0.78
CHFR-220ENST00000541817 TNNC2P02585 160 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 ITGA2BP08514 1039 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 KRT7P08729 469 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 HOXD9P28356 352 aaPredicted RBP10.15□□□□□ -0.78
CHFR-220ENST00000541817 CDC25BP30305 580 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 MLLT10P55197 1068 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 POLE2P56282 527 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 TPM4P67936 248 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 EFEMP1Q12805 493 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 ZNF177Q13360 481 aaPredicted RBP10.15□□□□□ -0.78
CHFR-220ENST00000541817 POSTNQ15063 836 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 E2F5Q15329 346 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 DTHD1Q6ZMT9 781 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 DYMQ7RTS9 669 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 PRPF39Q86UA1 669 aaKnown RBP10.15□□□□□ -0.78
CHFR-220ENST00000541817 CEP57L1Q8IYX8 460 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 ZSCAN1Q8NBB4 408 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 SPC24Q8NBT2 197 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 UBE2Q2Q8WVN8 375 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 GOLGA1Q92805 767 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 KLHDC7BQ96G42 594 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 ZNF830Q96NB3 372 aaPredicted RBP10.15□□□□□ -0.78
CHFR-220ENST00000541817 CBWD1Q9BRT8 395 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 GOLPH3LQ9H4A5 285 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 FBRSQ9HAH7 460 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 KCND2Q9NZV8 630 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 NAGPAQ9UK23 515 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 CLIC4Q9Y696 253 aa10.15□□□□□ -0.78
CHFR-220ENST00000541817 RP1P56715 2156 aa10.15□□□□□ -0.79
CHFR-220ENST00000541817 ATP8B3O60423 1300 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 MED13Q9UHV7 2174 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 VWA3AA6NCI4 1184 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 LZTS3O60299 673 aaPredicted RBP10.14□□□□□ -0.79
CHFR-220ENST00000541817 SEMA7AO75326 666 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 TBCAO75347 108 aaKnown RBP10.14□□□□□ -0.79
CHFR-220ENST00000541817 TACC1O75410 805 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 ALPPL2P10696 532 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 PABPC1P11940 636 aaKnown RBP10.14□□□□□ -0.79
CHFR-220ENST00000541817 GNLYP22749 145 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 GRNP28799 593 aaKnown RBP10.14□□□□□ -0.79
CHFR-220ENST00000541817 CD70P32970 193 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 UGT1A5P35504 534 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 NUMBP49757 651 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 SGSHP51688 502 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 PDX1P52945 283 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 TNNC1P63316 161 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 KCNMA1Q12791 1236 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 MORC3Q14149 939 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 WDR72Q3MJ13 1102 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 TMEM119Q4V9L6 283 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 B3GNT8Q7Z7M8 397 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 SCD5Q86SK9 330 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 ACOT1Q86TX2 421 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 SFR1Q86XK3 245 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 FUKQ8N0W3 1084 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 FMR1NBQ8N0W7 255 aaPredicted RBP10.14□□□□□ -0.79
CHFR-220ENST00000541817 FBXO39Q8N4B4 442 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 SPATA20Q8TB22 786 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 SSC4DQ8WTU2 575 aa10.14□□□□□ -0.79
CHFR-220ENST00000541817 SMARCD1Q96GM5 515 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms