RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 FLRT1Q9NZU1 646 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 TAGLN3Q9UI15 199 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 ARHGAP42A6NI28 874 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 ENO4A6NNW6 628 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 E9PBE3 544 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 PTGESO14684 152 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 KLHL41O60662 606 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 SLC34A1Q06495 639 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 CCL14Q16627 93 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 SPDYAQ5MJ70 313 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 OLFML2BQ68BL8 750 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 ARHGAP36Q6ZRI8 547 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 NT5DC4Q86YG4 428 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 HASPINQ8TF76 798 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 MTBPQ96DY7 904 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 PLEKHA5Q9HAU0 1116 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 LRRC4Q9HBW1 653 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 CRTAC1Q9NQ79 661 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 THAP1Q9NVV9 213 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 PTPN3P26045 913 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 CD68P34810 354 aaPredicted RBP14.41□□□□□ -0.1
UBE3B-210ENST00000539599 VHLP40337 213 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 GLRBP48167 497 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 ZNF460Q14592 562 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 KYAT1Q16773 422 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 C1orf146Q5VVC0 180 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 STEAP4Q687X5 459 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 TWF2Q6IBS0 349 aaKnown RBP14.41□□□□□ -0.1
UBE3B-210ENST00000539599 TMEM154Q6P9G4 183 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 MARK2Q7KZI7 788 aaKnown RBP14.41□□□□□ -0.1
UBE3B-210ENST00000539599 STRA8Q7Z7C7 330 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 SIX6OS1Q8N1H7 587 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 ZNF781Q8N8C0 355 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 C3orf58Q8NDZ4 430 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 PIWIL2Q8TC59 973 aaKnown RBP14.41□□□□□ -0.1
UBE3B-210ENST00000539599 MAPK15Q8TD08 544 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 SH3TC2Q8TF17 1288 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 CERS2Q96G23 380 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 FRMD8Q9BZ67 464 aaPredicted RBP14.41□□□□□ -0.1
UBE3B-210ENST00000539599 PPP1R12CQ9BZL4 782 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 STOML1Q9UBI4 398 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 COL1A2P08123 1366 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 ALDH1A2O94788 518 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 PROCP04070 461 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 UBTFL6P0CB48 400 aaPredicted RBP14.41□□□□□ -0.1
UBE3B-210ENST00000539599 NCAM1P13591 858 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 ZFXP17010 805 aaPredicted RBP14.41□□□□□ -0.1
UBE3B-210ENST00000539599 NPR3P17342 541 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 PTPN1P18031 435 aaKnown RBP14.41□□□□□ -0.1
UBE3B-210ENST00000539599 PGAM1P18669 254 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 TCHHL1Q5QJ38 904 aaPredicted RBP14.41□□□□□ -0.1
UBE3B-210ENST00000539599 STRADAQ7RTN6 431 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 ZDHHC17Q8IUH5 632 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 NPY6RQ99463 290 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 DUSP16Q9BY84 665 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 PIDD1Q9HB75 910 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 DLGAP2Q9P1A6 1054 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 MORF4L1Q9UBU8 362 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 TTC3P53804 2025 aa14.41□□□□□ -0.1
UBE3B-210ENST00000539599 RBM47A0AV96 593 aaKnown RBP14.4□□□□□ -0.1
UBE3B-210ENST00000539599 NEMP1O14524 444 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 XPO1O14980 1071 aaKnown RBP14.4□□□□□ -0.1
UBE3B-210ENST00000539599 SIN3BO75182 1162 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 CHRNGP07510 517 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 CTSHP09668 335 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 ARSAP15289 507 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 MSX2P35548 267 aaPredicted RBP14.4□□□□□ -0.1
UBE3B-210ENST00000539599 CPOXP36551 454 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 IDH3AP50213 366 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 OTOP3Q7RTS5 596 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 TMPRSS6Q8IU80 811 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 SHCBP1Q8NEM2 672 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 EMID1Q96A84 441 aaPredicted RBP14.4□□□□□ -0.1
UBE3B-210ENST00000539599 MS4A4AQ96JQ5 239 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 MLPHQ9BV36 600 aaPredicted RBP14.4□□□□□ -0.1
UBE3B-210ENST00000539599 DDX43Q9NXZ2 648 aaKnown RBP14.4□□□□□ -0.1
UBE3B-210ENST00000539599 TXNDC16Q9P2K2 825 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 NUDT5Q9UKK9 219 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.4□□□□□ -0.1
UBE3B-210ENST00000539599 MYL3P08590 195 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 SERPINB9P50453 376 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 DPYSQ14117 519 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 SLC9B1Q4ZJI4 515 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 EFHC1Q5JVL4 640 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 RABGAP1LQ5R372 815 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 FSTL4Q6MZW2 842 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 TTC39CQ8N584 583 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 SPATA22Q8NHS9 363 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 ZNF419Q96HQ0 510 aaPredicted RBP14.4□□□□□ -0.1
UBE3B-210ENST00000539599 SMOQ99835 787 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 DDIT4Q9NX09 232 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 MIOSQ9NXC5 875 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 COPG2Q9UBF2 871 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 CPA4Q9UI42 421 aa14.4□□□□□ -0.1
UBE3B-210ENST00000539599 A0A088AWK7 358 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 EME2A4GXA9 379 aaPredicted RBP14.39□□□□□ -0.11
UBE3B-210ENST00000539599 CASTOR2A6NHX0 329 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 DCLK1O15075 740 aa14.39□□□□□ -0.11
UBE3B-210ENST00000539599 PHGDHO43175 533 aaKnown RBP14.39□□□□□ -0.11
UBE3B-210ENST00000539599 DCXO43602 365 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms