RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 UNC93AQ86WB7 457 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 CCDC33Q8N5R6 958 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 BTBD10Q9BSF8 475 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 CXorf56Q9H5V9 222 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 CAPN10Q9HC96 672 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 A1CFQ9NQ94 594 aaKnown RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 WDR27A2RRH5 827 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 APOC4-APOC2K7ER74 178 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ZNF862O60290 1169 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TPST1O60507 370 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 APOC2P02655 101 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 GTF2E2P29084 291 aaKnown RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 PSEN1P49768 467 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 HK2P52789 917 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TRAF2Q12933 501 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 GSTA3Q16772 222 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TBCELQ5QJ74 424 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 OLFML2BQ68BL8 750 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 CYP20A1Q6UW02 462 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 SCUBE3Q8IX30 993 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 USP7Q93009 1102 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 APOL4Q9BPW4 351 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 FAM126AQ9BYI3 521 aaPredicted RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 GDF3Q9NR23 364 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 UBP1Q9NZI7 540 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 DNPEPQ9ULA0 475 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TNPO3Q9Y5L0 923 aaKnown RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 SNX8Q9Y5X2 465 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 A0A088AWK7 358 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 SLC9A3R1O14745 358 aaPredicted RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 KPNA5O15131 536 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TRIM13O60858 407 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ENDOD1O94919 500 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 CCDC130P13994 396 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TSHRP16473 764 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ZNF10P21506 573 aaPredicted RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 CDH8P55286 799 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TBX2Q13207 712 aaPredicted RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 CNGA2Q16280 664 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 SLC45A4Q5BKX6 768 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 DACT2Q5SW24 774 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 N4BP2L1Q5TBK1 243 aaPredicted RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ZBTB49Q6ZSB9 765 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 MILR1Q7Z6M3 343 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ADGRA1Q86SQ6 560 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 FAM45AQ8TCE6 357 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 CATSPER2Q96P56 530 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 QRFPRQ96P65 431 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TMEM237Q96Q45 408 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 DUSP9Q99956 384 aaKnown RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 HGH1Q9BTY7 390 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 RRAGCQ9HB90 399 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ZNF112Q9UJU3 913 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TBC1D12O60347 775 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 KLHL41O60662 606 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ERBB2P04626 1255 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 FYNP06241 537 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 POLR2EP19388 210 aaKnown RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 JAK1P23458 1154 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 MIPP30301 263 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TALDO1P37837 337 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 MMP13P45452 471 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 NME5P56597 212 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 RPS7P62081 194 aaKnown RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 PAGE2BQ5JRK9 111 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TFAP2DQ7Z6R9 452 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 UBR1Q8IWV7 1749 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TCP10LQ8TDR4 215 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ATP13A1Q9HD20 1204 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ZNF232Q9UNY5 417 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 LZTS1Q9Y250 596 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 SMIM22K7EJ46 135 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TRIM24O15164 1050 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ALDH9A1P49189 494 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 INSCQ1MX18 579 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 SETMARQ53H47 684 aaPredicted RBP6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ZNF662Q6ZS27 426 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 ZNF614Q8N883 585 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 LPCAT1Q8NF37 534 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TMEM79Q9BSE2 394 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 TMEM216Q9P0N5 145 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 SALL3Q9BXA9 1300 aa6.61□□□□□ -1.35
LSAMP-207ENST00000539563 GLI1P08151 1106 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 KDELR1P24390 212 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 ATP5C1P36542 298 aaKnown RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 CASP7P55210 303 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 ST3GAL1Q11201 340 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 TSNQ15631 228 aaKnown RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 MEA1Q16626 185 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 TRIM16LQ309B1 348 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 FNDC3BQ53EP0 1204 aaKnown RBP6.6□□□□□ -1.35
LSAMP-207ENST00000539563 DPP10Q8N608 796 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 FTHL17Q9BXU8 183 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 LACRTQ9GZZ8 138 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 LRRC4BQ9NT99 713 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 MORF4L1Q9UBU8 362 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 MROH1Q8NDA8 1641 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 A0A096LPK6 155 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 SGTAO43765 313 aa6.6□□□□□ -1.35
LSAMP-207ENST00000539563 CLPTM1O96005 669 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms