RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 MAPRE1Q15691 268 aaKnown RBP18.37■□□□□ 0.53
GNE-204ENST00000539208 CHI3L2Q15782 390 aa18.37■□□□□ 0.53
GNE-204ENST00000539208 ITPRIPL1Q6GPH6 555 aa18.37■□□□□ 0.53
GNE-204ENST00000539208 TBC1D10AQ9BXI6 508 aa18.37■□□□□ 0.53
GNE-204ENST00000539208 RHOBTB2Q9BYZ6 727 aa18.37■□□□□ 0.53
GNE-204ENST00000539208 DCDC2Q9UHG0 476 aa18.37■□□□□ 0.53
GNE-204ENST00000539208 MYO18AQ92614 2054 aaKnown RBP18.36■□□□□ 0.53
GNE-204ENST00000539208 ZBTB24O43167 697 aaPredicted RBP18.36■□□□□ 0.53
GNE-204ENST00000539208 GLRA3O75311 464 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 HAUS5O94927 633 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 SKIP12755 728 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 EZRP15311 586 aaKnown RBP18.36■□□□□ 0.53
GNE-204ENST00000539208 BDNFP23560 247 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 SREBF2Q12772 1141 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 TUSC3Q13454 348 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 EIF4EBP2Q13542 120 aaPredicted RBP18.36■□□□□ 0.53
GNE-204ENST00000539208 INSCQ1MX18 579 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 CTU1Q7Z7A3 348 aaKnown RBP18.36■□□□□ 0.53
GNE-204ENST00000539208 TMEM135Q86UB9 458 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 CEP57Q86XR8 500 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 OR52K1Q8NGK4 314 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 AGAP11Q8TF27 550 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 DPF3Q92784 378 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 ATP2A3Q93084 1043 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 CERS2Q96G23 380 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 CPNE1Q99829 537 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 PIH1D1Q9NWS0 290 aaKnown RBP18.36■□□□□ 0.53
GNE-204ENST00000539208 BFARQ9NZS9 450 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 ZFATQ9P243 1243 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 RPL26L1Q9UNX3 145 aaKnown RBP18.36■□□□□ 0.53
GNE-204ENST00000539208 RPS6KL1Q9Y6S9 549 aa18.36■□□□□ 0.53
GNE-204ENST00000539208 MAGEB16A2A368 324 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 POMCP01189 267 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 IGLV3-25P01717 112 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 ITGA2BP08514 1039 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 MYL2P10916 166 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 SERPINB3P29508 390 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 CD68P34810 354 aaPredicted RBP18.35■□□□□ 0.53
GNE-204ENST00000539208 FCGRTP55899 365 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 GRTP1Q5TC63 336 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 TAC4Q86UU9 113 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.35■□□□□ 0.53
GNE-204ENST00000539208 PTCD3Q96EY7 689 aaKnown RBP18.35■□□□□ 0.53
GNE-204ENST00000539208 ARHGEF37A1IGU5 675 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 A8MUI8 341 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 LRIG2O94898 1065 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 GSRP00390 522 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 ATP5BP06576 529 aaKnown RBP18.35■□□□□ 0.53
GNE-204ENST00000539208 EPHB2P29323 1055 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 GP5P40197 560 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 BRCC3P46736 316 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 NPY2RP49146 381 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 PDE1CQ14123 709 aaPredicted RBP18.35■□□□□ 0.53
GNE-204ENST00000539208 LPIN1Q14693 890 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 CES4AQ5XG92 561 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 RASSF3Q86WH2 238 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 DQX1Q8TE96 717 aaKnown RBP18.35■□□□□ 0.53
GNE-204ENST00000539208 RSPH1Q8WYR4 309 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 NSL1Q96IY1 281 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 TMLHEQ9NVH6 421 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 ADAM28Q9UKQ2 775 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 VANGL2Q9ULK5 521 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 PSAT1Q9Y617 370 aa18.35■□□□□ 0.53
GNE-204ENST00000539208 FAM237BA0A1B0GVD1 139 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 AP3B1O00203 1094 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 TPP1O14773 563 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 INPPL1O15357 1258 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 USP1O94782 785 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 ASGR1P07306 291 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 ZBTB16Q05516 673 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 STX3Q13277 289 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 FAM26DQ5JW98 314 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 KLHDC8BQ8IXV7 354 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 THEM5Q8N1Q8 247 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 KLHDC9Q8NEP7 349 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 ZSCAN18Q8TBC5 510 aaPredicted RBP18.34■□□□□ 0.53
GNE-204ENST00000539208 ISL2Q96A47 359 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 TEKT5Q96M29 485 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 FCRL3Q96P31 734 aaPredicted RBP18.34■□□□□ 0.53
GNE-204ENST00000539208 THAP1Q9NVV9 213 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 ARHGEF38Q9NXL2 777 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 TXNDC16Q9P2K2 825 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 SLC17A6Q9P2U8 582 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 EMCNQ9ULC0 261 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 FAM155AB1AL88 458 aaPredicted RBP18.34■□□□□ 0.53
GNE-204ENST00000539208 CA12O43570 354 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 CCDC22O60826 627 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 HTR7P34969 479 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 COG7P83436 770 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 ZBTB17Q13105 803 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 OVOS1Q6IE37 1185 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 LRRTM3Q86VH5 581 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 LONP2Q86WA8 852 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 CRLF3Q8IUI8 442 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.34■□□□□ 0.53
GNE-204ENST00000539208 OR10T2Q8NGX3 314 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 TBC1D31Q96DN5 1066 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 SUSD3Q96L08 255 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 TSGA13Q96PP4 275 aa18.34■□□□□ 0.53
GNE-204ENST00000539208 ADAM2Q99965 735 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms