RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 ERI2A8K979 691 aaKnown RBP15.19■□□□□ 0.02
ATL3-203ENST00000538786 SOAT2O75908 522 aa15.19■□□□□ 0.02
ATL3-203ENST00000538786 ALDH7A1P49419 539 aaKnown RBP15.19■□□□□ 0.02
ATL3-203ENST00000538786 MLLT6P55198 1093 aaPredicted RBP15.19■□□□□ 0.02
ATL3-203ENST00000538786 RPL10AP62906 217 aaKnown RBP15.19■□□□□ 0.02
ATL3-203ENST00000538786 IL9RQ01113 521 aa15.19■□□□□ 0.02
ATL3-203ENST00000538786 ZBTB17Q13105 803 aa15.19■□□□□ 0.02
ATL3-203ENST00000538786 STEAP4Q687X5 459 aa15.19■□□□□ 0.02
ATL3-203ENST00000538786 GDAP1Q8TB36 358 aa15.19■□□□□ 0.02
ATL3-203ENST00000538786 DEPDC1BQ8WUY9 529 aa15.19■□□□□ 0.02
ATL3-203ENST00000538786 ALKBH8Q96BT7 664 aaKnown RBP15.19■□□□□ 0.02
ATL3-203ENST00000538786 SEC16BQ96JE7 1060 aa15.19■□□□□ 0.02
ATL3-203ENST00000538786 MAGEB18Q96M61 343 aa15.19■□□□□ 0.02
ATL3-203ENST00000538786 TSGA13Q96PP4 275 aa15.19■□□□□ 0.02
ATL3-203ENST00000538786 GORASP1Q9BQQ3 440 aa15.19■□□□□ 0.02
ATL3-203ENST00000538786 CRISPLD2Q9H0B8 497 aa15.19■□□□□ 0.02
ATL3-203ENST00000538786 NSRP1Q9H0G5 558 aaKnown RBP15.19■□□□□ 0.02
ATL3-203ENST00000538786 GBA3Q9H227 469 aa15.19■□□□□ 0.02
ATL3-203ENST00000538786 CRISPLD1Q9H336 500 aa15.19■□□□□ 0.02
ATL3-203ENST00000538786 TLR8Q9NR97 1041 aaKnown RBP15.19■□□□□ 0.02
ATL3-203ENST00000538786 OLA1Q9NTK5 396 aaKnown RBP15.19■□□□□ 0.02
ATL3-203ENST00000538786 HS3ST4Q9Y661 456 aa15.19■□□□□ 0.02
ATL3-203ENST00000538786 TTC3P53804 2025 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 VWA8A3KMH1 1905 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 TANC1Q9C0D5 1861 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 E9PAM4 449 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 ZBTB24O43167 697 aaPredicted RBP15.18■□□□□ 0.02
ATL3-203ENST00000538786 SUN1O94901 812 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 ASMTLO95671 621 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 AP2A1O95782 977 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 EFEMP2O95967 443 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 MOCS2O96007 188 aaPredicted RBP15.18■□□□□ 0.02
ATL3-203ENST00000538786 CA4P22748 312 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 CCNCP24863 283 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 TUBP50607 506 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 WDR4P57081 412 aaKnown RBP15.18■□□□□ 0.02
ATL3-203ENST00000538786 TBX4P57082 545 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 IKBKEQ14164 716 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.18■□□□□ 0.022e-6■■■□□ 16.5
ATL3-203ENST00000538786 ARHGAP12Q8IWW6 846 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 CTAGE3PQ8IX95 158 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 CACNA2D3Q8IZS8 1091 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 PPM1NQ8N819 430 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 ZSCAN18Q8TBC5 510 aaPredicted RBP15.18■□□□□ 0.02
ATL3-203ENST00000538786 TEKT5Q96M29 485 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 NAT9Q9BTE0 207 aa15.18■□□□□ 0.02
ATL3-203ENST00000538786 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.18■□□□□ 0.02
ATL3-203ENST00000538786 ATXN2Q99700 1313 aaKnown RBP15.18■□□□□ 0.02
ATL3-203ENST00000538786 WDR27A2RRH5 827 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 FAM159BA6NKW6 160 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 CXorf49A8MYA2 514 aaPredicted RBP15.17■□□□□ 0.02
ATL3-203ENST00000538786 TCP11X1B4DZS4 312 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 ZWINTO95229 277 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 MT-ND3P03897 115 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 CD68P34810 354 aaPredicted RBP15.17■□□□□ 0.02
ATL3-203ENST00000538786 RPA3P35244 121 aaPredicted RBP15.17■□□□□ 0.02
ATL3-203ENST00000538786 TAF10Q12962 218 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 SPARCL1Q14515 664 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 TTC39BQ5VTQ0 682 aaPredicted RBP15.17■□□□□ 0.02
ATL3-203ENST00000538786 NUGGCQ68CJ6 796 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 CNKSR3Q6P9H4 555 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 PRSS55Q6UWB4 352 aaPredicted RBP15.17■□□□□ 0.02
ATL3-203ENST00000538786 PIGWQ7Z7B1 504 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 SRLQ86TD4 932 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 AGAP3Q96P47 875 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 MOCS1Q9NZB8 636 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 FNIP2Q9P278 1114 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 TBX21Q9UL17 535 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 CDY1Q9Y6F8 540 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 FAM169AQ9Y6X4 670 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 PLXNA3P51805 1871 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 CEP350Q5VT06 3117 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 BRCA2P51587 3418 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 WASH4PA8MWX3 477 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 DFFAO00273 331 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 ALDH1A2O94788 518 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 UPP2O95045 317 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 PGAM1P18669 254 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 MGAT1P26572 445 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 SESN2P58004 480 aaPredicted RBP15.17■□□□□ 0.02
ATL3-203ENST00000538786 EFEMP1Q12805 493 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 DUSP4Q13115 394 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 TRIP4Q15650 581 aaPredicted RBP15.17■□□□□ 0.02
ATL3-203ENST00000538786 USP41Q3LFD5 358 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 LGSNQ5TDP6 509 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 PIK3R6Q5UE93 754 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 AFMIDQ63HM1 303 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 KCTD11Q693B1 232 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 SLC8B1Q6J4K2 584 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 CASC4Q6P4E1 433 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 TRMT10BQ6PF06 316 aaKnown RBP15.17■□□□□ 0.02
ATL3-203ENST00000538786 ATPAF2Q8N5M1 289 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 RTL3Q8N8U3 475 aaKnown RBP15.17■□□□□ 0.02
ATL3-203ENST00000538786 BANPQ8N9N5 519 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 FBXO22Q8NEZ5 403 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 ARNTL2Q8WYA1 636 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 CEP295NLQ96MC4 621 aa15.17■□□□□ 0.02
ATL3-203ENST00000538786 TGS1Q96RS0 853 aaKnown RBP15.17■□□□□ 0.02
ATL3-203ENST00000538786 TRIM56Q9BRZ2 755 aaKnown RBP15.17■□□□□ 0.02
ATL3-203ENST00000538786 SMYD2Q9NRG4 433 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms