RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 CWC15Q9P013 229 aaKnown RBP7.44□□□□□ -1.22
MSH6-209ENST00000538136 GULP1Q9UBP9 304 aa7.44□□□□□ -1.22
MSH6-209ENST00000538136 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 ANO9A1A5B4 782 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 ADH5P11766 374 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 LAMP2P13473 410 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 TACR2P21452 398 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 CSKP41240 450 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 SGCGQ13326 291 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 TFDP2Q14188 446 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 POU6F1Q14863 301 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 ACOX1Q15067 660 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 ITPRIPL2Q3MIP1 535 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 HS1BP3Q53T59 392 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 ANKRD54Q6NXT1 300 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 C16orf46Q6P387 395 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 CRTC1Q6UUV9 634 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 Q6ZS52 159 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 PALM2Q8IXS6 379 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 TMEFF1Q8IYR6 380 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 PNPLA1Q8N8W4 532 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 WBP2Q969T9 261 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 SMOC1Q9H4F8 434 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 FZD3Q9NPG1 666 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 STYXL1Q9Y6J8 313 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 ATXN2Q99700 1313 aaKnown RBP7.43□□□□□ -1.22
MSH6-209ENST00000538136 EPG5Q9HCE0 2579 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 DCLK1O15075 740 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 TULP3O75386 442 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 F9P00740 461 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 DNTTP04053 509 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 ETS1P14921 441 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 ABL2P42684 1182 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 OTUD4Q01804 1114 aaKnown RBP7.43□□□□□ -1.22
MSH6-209ENST00000538136 CSTF1Q05048 431 aaKnown RBP7.43□□□□□ -1.22
MSH6-209ENST00000538136 RUNX3Q13761 415 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 NAA30Q147X3 362 aaPredicted RBP7.43□□□□□ -1.22
MSH6-209ENST00000538136 DLG2Q15700 870 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 ALFQ53S48 1182 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 ERMARDQ5T6L9 678 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 SYCE2Q6PIF2 218 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 XYLT1Q86Y38 959 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 CCDC170Q8IYT3 715 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 CELF5Q8N6W0 485 aaKnown RBP7.43□□□□□ -1.22
MSH6-209ENST00000538136 PDZD8Q8NEN9 1154 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 RPLP0P6Q8NHW5 317 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 COG1Q8WTW3 980 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 PSMG2Q969U7 264 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 ZCWPW1Q9H0M4 648 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 CCDC68Q9H2F9 335 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 SIX2Q9NPC8 291 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 NDFIP2Q9NV92 336 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 MYO6Q9UM54 1294 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 CHKBQ9Y259 395 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.43□□□□□ -1.22
MSH6-209ENST00000538136 PDZK1P1A8MUH7 402 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 ACSL4O60488 711 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 TJP3O95049 919 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 MT-CO1P00395 513 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 HOXB8P17481 243 aaPredicted RBP7.43□□□□□ -1.22
MSH6-209ENST00000538136 ITIH2P19823 946 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 ADRA1BP35368 520 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 PRAMEP78395 509 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 PIGHQ14442 188 aaPredicted RBP7.43□□□□□ -1.22
MSH6-209ENST00000538136 PRPSAP1Q14558 356 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 MARC1Q5VT66 337 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 USP13Q92995 863 aaPredicted RBP7.43□□□□□ -1.22
MSH6-209ENST00000538136 TBC1D31Q96DN5 1066 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 SIPA1Q96FS4 1042 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 RMDN2Q96LZ7 410 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 BPIFA3Q9BQP9 254 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 GDAP2Q9NXN4 497 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 FIS1Q9Y3D6 152 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 R4GN57 208 aa7.43□□□□□ -1.22
MSH6-209ENST00000538136 SDC3O75056 442 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 MMP8P22894 467 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 CLCN4P51793 760 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 SRSF5Q13243 272 aaKnown RBP7.42□□□□□ -1.22
MSH6-209ENST00000538136 CAMK1Q14012 370 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 GALNT3Q14435 633 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 PPP2R5EQ16537 467 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 ZRANB3Q5FWF4 1079 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.42□□□□□ -1.22
MSH6-209ENST00000538136 C12orf50Q8NA57 414 aaPredicted RBP7.42□□□□□ -1.22
MSH6-209ENST00000538136 PANX2Q96RD6 677 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 SEMA3CQ99985 751 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 RTP3Q9BQQ7 232 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 TRIM51Q9BSJ1 452 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 HSD3B7Q9H2F3 369 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 OSER1Q9NX31 292 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 NCDNQ9UBB6 729 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 ARHGAP42A6NI28 874 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 FAM72CH0Y354 149 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 NCAM2O15394 837 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 KAT7O95251 611 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 ACSL3O95573 720 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 CHRNB2P17787 502 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 SERPINB6P35237 376 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 ARSEP51690 589 aa7.42□□□□□ -1.22
MSH6-209ENST00000538136 THOP1P52888 689 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms