RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 P3H4Q92791 437 aa16.1■□□□□ 0.17
SFSWAP-206ENST00000537582 FGF14Q92915 247 aa16.1■□□□□ 0.17
SFSWAP-206ENST00000537582 MAGOHBQ96A72 148 aaKnown RBP16.1■□□□□ 0.17
SFSWAP-206ENST00000537582 KRT12Q99456 494 aa16.1■□□□□ 0.17
SFSWAP-206ENST00000537582 RPP25Q9BUL9 199 aaKnown RBP16.1■□□□□ 0.17
SFSWAP-206ENST00000537582 TRPV4Q9HBA0 871 aa16.1■□□□□ 0.17
SFSWAP-206ENST00000537582 CLEC4EQ9ULY5 219 aa16.1■□□□□ 0.17
SFSWAP-206ENST00000537582 FGF10O15520 208 aaPredicted RBP16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 MBTPS2O43462 519 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 TBL1XO60907 577 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 PHF2O75151 1096 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 SLU7O95391 586 aaKnown RBP16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 TGM2P21980 687 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 HTR7P34969 479 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 ZNF135P52742 658 aaPredicted RBP16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 NRLP54845 237 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 MTA1Q13330 715 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 GRM2Q14416 872 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 NOMO1Q15155 1222 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 CYP1B1Q16678 543 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 VITQ6UXI7 678 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 PRUNE1Q86TP1 453 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 MNS1Q8NEH6 495 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 WFDC5Q8TCV5 224 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 DEPDC1BQ8WUY9 529 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 CATSPERBQ9H7T0 1116 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 KIF9Q9HAQ2 790 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 PRDM6Q9NQX0 595 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 TMEM248Q9NWD8 314 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 V9GYY5 206 aaPredicted RBP16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 GOLGA6L10A0A0M3HER8 536 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 WASH4PA8MWX3 477 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 ARSAP15289 507 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 ZFXP17010 805 aaPredicted RBP16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 EIF3EP60228 445 aaKnown RBP16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 SMAD4Q13485 552 aaKnown RBP16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 RABGAP1LQ5R372 815 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 ARHGAP36Q6ZRI8 547 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 CPXM2Q8N436 756 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 C12orf50Q8NA57 414 aaPredicted RBP16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 SLC35B2Q8TB61 432 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 BPIFB1Q8TDL5 484 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 MAIP1Q8WWC4 291 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 TMA16Q96EY4 203 aaKnown RBP16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 NECTIN4Q96NY8 510 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 OLFM3Q96PB7 478 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 DDX50Q9BQ39 737 aaKnown RBP16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 SLC39A8Q9C0K1 460 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 ZNF510Q9Y2H8 683 aa16.09■□□□□ 0.17
SFSWAP-206ENST00000537582 HOXD9P28356 352 aaPredicted RBP16.08■□□□□ 0.16
SFSWAP-206ENST00000537582 COILP38432 576 aaPredicted RBP16.08■□□□□ 0.16
SFSWAP-206ENST00000537582 CCNG2Q16589 344 aa16.08■□□□□ 0.16
SFSWAP-206ENST00000537582 FSCBQ5H9T9 825 aa16.08■□□□□ 0.16
SFSWAP-206ENST00000537582 AFMIDQ63HM1 303 aa16.08■□□□□ 0.16
SFSWAP-206ENST00000537582 HJURPQ8NCD3 748 aaPredicted RBP16.08■□□□□ 0.16
SFSWAP-206ENST00000537582 DDI1Q8WTU0 396 aa16.08■□□□□ 0.16
SFSWAP-206ENST00000537582 RSAD2Q8WXG1 361 aa16.08■□□□□ 0.16
SFSWAP-206ENST00000537582 HLA-CQ95604 372 aa16.08■□□□□ 0.16
SFSWAP-206ENST00000537582 LGMNQ99538 433 aa16.08■□□□□ 0.16
SFSWAP-206ENST00000537582 HINFPQ9BQA5 517 aa16.08■□□□□ 0.16
SFSWAP-206ENST00000537582 EPC1Q9H2F5 836 aa16.08■□□□□ 0.16
SFSWAP-206ENST00000537582 LRRC19Q9H756 370 aa16.08■□□□□ 0.16
SFSWAP-206ENST00000537582 ZFP14Q9HCL3 533 aa16.08■□□□□ 0.16
SFSWAP-206ENST00000537582 DUS2Q9NX74 493 aaKnown RBP16.08■□□□□ 0.16
SFSWAP-206ENST00000537582 AMACRQ9UHK6 382 aa16.08■□□□□ 0.16
SFSWAP-206ENST00000537582 A0A0D9SEW6 157 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 OTOL1A6NHN0 477 aaPredicted RBP16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 DFFAO00273 331 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 RBP3P10745 1247 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 OR1E1P30953 314 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 CHKAP35790 457 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 ACVRL1P37023 503 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 TFF2Q03403 129 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 TNK2Q07912 1038 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 BYSLQ13895 437 aaKnown RBP16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 NAA30Q147X3 362 aaPredicted RBP16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 OASLQ15646 514 aaKnown RBP16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 LY6G5CQ5SRR4 150 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 TEX35Q5T0J7 233 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 ACBD5Q5T8D3 534 aaPredicted RBP16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 FYB2Q5VWT5 728 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 CXorf57Q6NSI4 855 aaKnown RBP16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 RHBDF2Q6PJF5 856 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 CCDC137Q6PK04 289 aaKnown RBP16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 ADGRG2Q8IZP9 1017 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 CARNMT1Q8N4J0 409 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 GLIS1Q8NBF1 620 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 OSCP1Q8WVF1 389 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 HMCESQ96FZ2 354 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 TMEM121Q9BTD3 319 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 LRRC1Q9BTT6 524 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 EBF3Q9H4W6 596 aa16.07■□□□□ 0.16
SFSWAP-206ENST00000537582 A0A1B0GVM2 712 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 TCAF2A6NFQ2 919 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 C2CD4DB7Z1M9 353 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 NEDD8-MDP1E9PL57 170 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 H7C0C1 242 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 CCDC188H7C350 402 aa16.06■□□□□ 0.16
SFSWAP-206ENST00000537582 MCF2LO15068 1137 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms