RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 AIPL1Q9NZN9 384 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 SLC12A6Q9UHW9 1150 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 PLA2G4CQ9UP65 541 aa18.46■□□□□ 0.55
TNFRSF1A-209ENST00000536717 KNL1Q8NG31 2342 aa18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PATE3B3GLJ2 98 aa18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 F5H5T6 163 aa18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ATP5BP06576 529 aaKnown RBP18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 POLR2EP19388 210 aaKnown RBP18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 CAMK2GQ13555 558 aaPredicted RBP18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TSR1Q2NL82 804 aaKnown RBP18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 FNDC3BQ53EP0 1204 aaKnown RBP18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 FAM102AQ5T9C2 384 aaPredicted RBP18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TRNP1Q6NT89 227 aa18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 DEFB119Q8N690 84 aa18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PIGKQ92643 395 aa18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SYN2Q92777 582 aaPredicted RBP18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 RNF34Q969K3 372 aa18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PIGVQ9NUD9 493 aa18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TMEM74BQ9NUR3 256 aa18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 RRN3Q9NYV6 651 aa18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 USP36Q9P275 1121 aaKnown RBP18.45■□□□□ 0.54
TNFRSF1A-209ENST00000536717 NCOR2Q9Y618 2525 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 I6L893 689 aaPredicted RBP18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 FLT3P36888 993 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 CSKP41240 450 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 LIMK1P53667 647 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TBX2Q13207 712 aaPredicted RBP18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 LYSMD4Q5XG99 296 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 FBXL22Q6P050 247 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 CIR1Q86X95 450 aaPredicted RBP18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 CNGA4Q8IV77 575 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SLC41A1Q8IVJ1 513 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PGAP3Q96FM1 320 aaPredicted RBP18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SIPA1Q96FS4 1042 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ANLNQ9NQW6 1124 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ITM2CQ9NQX7 267 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TMEM59LQ9UK28 342 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 STAP1Q9ULZ2 295 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 HS3ST4Q9Y661 456 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PCDH15Q96QU1 1955 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 LNP1A1A4G5 178 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 H0Y626 953 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 C7P10643 843 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ITPKAP23677 461 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 GGCXP38435 758 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 CXCR3P49682 368 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SULT1E1P49888 294 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ZNF33AQ06730 810 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 AUHQ13825 339 aaKnown RBP18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PITRM1Q5JRX3 1037 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PEAR1Q5VY43 1037 aaPredicted RBP18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 IRF2BP2Q7Z5L9 587 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 CACUL1Q86Y37 369 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 CCAR2Q8N163 923 aaKnown RBP18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 MSANTD4Q8NCY6 345 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 OR8K1Q8NGG5 319 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 OR2T3Q8NH03 318 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 IGSF8Q969P0 613 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 MRGPRX3Q96LB0 322 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PCDHB18PQ96TA0 734 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TBCBQ99426 244 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ARHGEF38Q9NXL2 777 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 KIAA1522Q9P206 1035 aaPredicted RBP18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PILRBQ9UKJ0 227 aa18.44■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ATXN2Q99700 1313 aaKnown RBP18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 A0A1B0GVM2 712 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 DCDC2BA2VCK2 349 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TCAF2A6NFQ2 919 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 GOLGA6L6A8MZA4 724 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 AKR1B15C9JRZ8 316 aaPredicted RBP18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 GOLGA8SH3BPF8 625 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 MFAP3LO75121 409 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PAGE1O75459 146 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 UNGP13051 313 aaPredicted RBP18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 MMP8P22894 467 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 TPMTP51580 245 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 IRAK1P51617 712 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 CENPCQ03188 943 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 KLHL30Q0D2K2 578 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PLEKHG6Q3KR16 790 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SLC25A52Q3SY17 297 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 BNIPLQ7Z465 357 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 SYT12Q8IV01 421 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 CCDC117Q8IWD4 279 aaPredicted RBP18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 APCDD1Q8J025 514 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ANP32BQ92688 251 aaKnown RBP18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PRCCQ92733 491 aaPredicted RBP18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PRSS16Q9NQE7 514 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ZNHIT6Q9NWK9 470 aaKnown RBP18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 WSB2Q9NYS7 404 aaPredicted RBP18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 VANGL2Q9ULK5 521 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 BZW2Q9Y6E2 419 aaKnown RBP18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 CHD5Q8TDI0 1954 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PCNX2A6NKB5 2137 aa18.43■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ASLP04424 464 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 CD6P30203 668 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 PRKCIP41743 596 aa18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 CTSOP43234 321 aaPredicted RBP18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 ADKP55263 362 aaKnown RBP18.42■□□□□ 0.54
TNFRSF1A-209ENST00000536717 IRX4P78413 519 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms