RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 MGAT5BQ3V5L5 792 aa23.28■■□□□ 1.32
HMGA2-206ENST00000536545 PRSS55Q6UWB4 352 aaPredicted RBP23.28■■□□□ 1.32
HMGA2-206ENST00000536545 ZSCAN18Q8TBC5 510 aaPredicted RBP23.28■■□□□ 1.32
HMGA2-206ENST00000536545 STAMBPL1Q96FJ0 436 aa23.28■■□□□ 1.32
HMGA2-206ENST00000536545 VAT1Q99536 393 aa23.28■■□□□ 1.32
HMGA2-206ENST00000536545 SEPT5Q99719 369 aaPredicted RBP23.28■■□□□ 1.32
HMGA2-206ENST00000536545 CATSPERBQ9H7T0 1116 aa23.28■■□□□ 1.32
HMGA2-206ENST00000536545 COMMD8Q9NX08 183 aa23.28■■□□□ 1.32
HMGA2-206ENST00000536545 MOCS2O96007 188 aaPredicted RBP23.27■■□□□ 1.32
HMGA2-206ENST00000536545 INHBAP08476 426 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 PIK3R6Q5UE93 754 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 CPLX4Q7Z7G2 160 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 SLC26A11Q86WA9 606 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 SPATS2Q86XZ4 545 aaKnown RBP23.27■■□□□ 1.32
HMGA2-206ENST00000536545 RNF168Q8IYW5 571 aaPredicted RBP23.27■■□□□ 1.32
HMGA2-206ENST00000536545 GDAP1Q8TB36 358 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 TSGA13Q96PP4 275 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 SMYD2Q9NRG4 433 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.27■■□□□ 1.32
HMGA2-206ENST00000536545 ZNF180Q9UJW8 692 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 FAM159BA6NKW6 160 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 CXorf49A8MYA2 514 aaPredicted RBP23.27■■□□□ 1.32
HMGA2-206ENST00000536545 E9PAM4 449 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 ZBTB24O43167 697 aaPredicted RBP23.27■■□□□ 1.32
HMGA2-206ENST00000536545 SUN1O94901 812 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 ASMTLO95671 621 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 AP2A1O95782 977 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 SLC2A3P11169 496 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 TBX4P57082 545 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 TEX44Q53QW1 395 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 AFMIDQ63HM1 303 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 ITPRIPL1Q6GPH6 555 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 CNKSR3Q6P9H4 555 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 C14orf80Q86SX3 495 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 LZTR1Q8N653 840 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 C1orf74Q96LT6 269 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 BEGAINQ9BUH8 593 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 VN1R3Q9BXE9 311 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 CWH43Q9H720 699 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 MTRRQ9UBK8 725 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 IKBKGQ9Y6K9 419 aa23.27■■□□□ 1.32
HMGA2-206ENST00000536545 ATXN2Q99700 1313 aaKnown RBP23.27■■□□□ 1.32
HMGA2-206ENST00000536545 LTBP2Q14767 1821 aa23.26■■□□□ 1.31
HMGA2-206ENST00000536545 IQANK1A0A1B0GTG1 560 aa23.26■■□□□ 1.31
HMGA2-206ENST00000536545 WDR27A2RRH5 827 aa23.26■■□□□ 1.31
HMGA2-206ENST00000536545 SDR42E2A6NKP2 422 aa23.26■■□□□ 1.31
HMGA2-206ENST00000536545 KRT4P19013 534 aa23.26■■□□□ 1.31
HMGA2-206ENST00000536545 PSEN1P49768 467 aa23.26■■□□□ 1.31
HMGA2-206ENST00000536545 KCTD11Q693B1 232 aa23.26■■□□□ 1.31
HMGA2-206ENST00000536545 TRMT10BQ6PF06 316 aaKnown RBP23.26■■□□□ 1.31
HMGA2-206ENST00000536545 LRRC6Q86X45 466 aa23.26■■□□□ 1.31
HMGA2-206ENST00000536545 ZNF683Q8IZ20 524 aa23.26■■□□□ 1.31
HMGA2-206ENST00000536545 RTL3Q8N8U3 475 aaKnown RBP23.26■■□□□ 1.31
HMGA2-206ENST00000536545 ARNTL2Q8WYA1 636 aa23.26■■□□□ 1.31
HMGA2-206ENST00000536545 SEC16BQ96JE7 1060 aa23.26■■□□□ 1.31
HMGA2-206ENST00000536545 NUP205Q92621 2012 aa23.26■■□□□ 1.31
HMGA2-206ENST00000536545 SHROOM3Q8TF72 1996 aa23.26■■□□□ 1.31
HMGA2-206ENST00000536545 ADAM12O43184 909 aa23.25■■□□□ 1.31
HMGA2-206ENST00000536545 MGAT1P26572 445 aa23.25■■□□□ 1.31
HMGA2-206ENST00000536545 MLLT6P55198 1093 aaPredicted RBP23.25■■□□□ 1.31
HMGA2-206ENST00000536545 EFEMP1Q12805 493 aa23.25■■□□□ 1.31
HMGA2-206ENST00000536545 TAF10Q12962 218 aa23.25■■□□□ 1.31
HMGA2-206ENST00000536545 DUSP4Q13115 394 aa23.25■■□□□ 1.31
HMGA2-206ENST00000536545 TRIP4Q15650 581 aaPredicted RBP23.25■■□□□ 1.31
HMGA2-206ENST00000536545 GKAP1Q5VSY0 366 aaPredicted RBP23.25■■□□□ 1.31
HMGA2-206ENST00000536545 SLC8B1Q6J4K2 584 aa23.25■■□□□ 1.31
HMGA2-206ENST00000536545 CYS1Q717R9 158 aa23.25■■□□□ 1.31
HMGA2-206ENST00000536545 TAX1BP1Q86VP1 789 aa23.25■■□□□ 1.31
HMGA2-206ENST00000536545 ATPAF2Q8N5M1 289 aa23.25■■□□□ 1.31
HMGA2-206ENST00000536545 PPM1NQ8N819 430 aa23.25■■□□□ 1.31
HMGA2-206ENST00000536545 DIS3LQ8TF46 1054 aaKnown RBP23.25■■□□□ 1.31
HMGA2-206ENST00000536545 TEKT5Q96M29 485 aa23.25■■□□□ 1.31
HMGA2-206ENST00000536545 MAGEB18Q96M61 343 aa23.25■■□□□ 1.31
HMGA2-206ENST00000536545 MLPHQ9BV36 600 aaPredicted RBP23.25■■□□□ 1.31
HMGA2-206ENST00000536545 TLR8Q9NR97 1041 aaKnown RBP23.25■■□□□ 1.31
HMGA2-206ENST00000536545 OLA1Q9NTK5 396 aaKnown RBP23.25■■□□□ 1.31
HMGA2-206ENST00000536545 CDY1Q9Y6F8 540 aa23.25■■□□□ 1.31
HMGA2-206ENST00000536545 ERI2A8K979 691 aaKnown RBP23.24■■□□□ 1.31
HMGA2-206ENST00000536545 WASH4PA8MWX3 477 aa23.24■■□□□ 1.31
HMGA2-206ENST00000536545 TCP11X1B4DZS4 312 aa23.24■■□□□ 1.31
HMGA2-206ENST00000536545 DFFAO00273 331 aa23.24■■□□□ 1.31
HMGA2-206ENST00000536545 ALDH1A2O94788 518 aa23.24■■□□□ 1.31
HMGA2-206ENST00000536545 UPP2O95045 317 aa23.24■■□□□ 1.31
HMGA2-206ENST00000536545 VIMP08670 466 aaKnown RBP23.24■■□□□ 1.31
HMGA2-206ENST00000536545 CSH1P0DML2 217 aa23.24■■□□□ 1.31
HMGA2-206ENST00000536545 CSH2P0DML3 217 aa23.24■■□□□ 1.31
HMGA2-206ENST00000536545 ATF6P18850 670 aa23.24■■□□□ 1.31
HMGA2-206ENST00000536545 NFKB1P19838 968 aa23.24■■□□□ 1.31
HMGA2-206ENST00000536545 RPA3P35244 121 aaPredicted RBP23.24■■□□□ 1.31
HMGA2-206ENST00000536545 TUBP50607 506 aa23.24■■□□□ 1.31
HMGA2-206ENST00000536545 SESN2P58004 480 aaPredicted RBP23.24■■□□□ 1.31
HMGA2-206ENST00000536545 RPL10AP62906 217 aaKnown RBP23.24■■□□□ 1.31
HMGA2-206ENST00000536545 ARHGAP36Q6ZRI8 547 aa23.24■■□□□ 1.31
HMGA2-206ENST00000536545 CTAGE3PQ8IX95 158 aa23.24■■□□□ 1.31
HMGA2-206ENST00000536545 KLHDC8BQ8IXV7 354 aa23.24■■□□□ 1.31
HMGA2-206ENST00000536545 FBXO22Q8NEZ5 403 aa23.24■■□□□ 1.31
HMGA2-206ENST00000536545 AGAP3Q96P47 875 aa23.24■■□□□ 1.31
HMGA2-206ENST00000536545 NSRP1Q9H0G5 558 aaKnown RBP23.24■■□□□ 1.31
HMGA2-206ENST00000536545 SYBUQ9NX95 663 aa23.24■■□□□ 1.31
HMGA2-206ENST00000536545 MOCS1Q9NZB8 636 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms