RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 LOC100653049A0A140TA62 436 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 TM9SF1O15321 606 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 KRT34O76011 436 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 IFNB1P01574 187 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 C21orf59P57076 290 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 YWHAEP62258 255 aaKnown RBP14.33□□□□□ -0.12
LIG1-203ENST00000536218 PTPN11Q06124 597 aaPredicted RBP14.33□□□□□ -0.12
LIG1-203ENST00000536218 GRB14Q14449 540 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 CLPPQ16740 277 aaPredicted RBP14.33□□□□□ -0.12
LIG1-203ENST00000536218 FAM182AQ5T1J6 154 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 AHI1Q8N157 1196 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 C12orf29Q8N999 325 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 SLC4A11Q8NBS3 891 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 THAP11Q96EK4 314 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 PAFAH2Q99487 392 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 TRIM56Q9BRZ2 755 aaKnown RBP14.33□□□□□ -0.12
LIG1-203ENST00000536218 MORF4L1Q9UBU8 362 aa14.33□□□□□ -0.12
LIG1-203ENST00000536218 LRRC37A2A6NM11 1700 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 DENRO43583 198 aaKnown RBP14.32□□□□□ -0.12
LIG1-203ENST00000536218 GRAP2O75791 330 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 TGDSO95455 350 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 LSM8O95777 96 aaKnown RBP14.32□□□□□ -0.12
LIG1-203ENST00000536218 ITGBL1O95965 494 aaPredicted RBP14.32□□□□□ -0.12
LIG1-203ENST00000536218 CYP2B6P20813 491 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 S100A1P23297 94 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 PPARGP37231 505 aaPredicted RBP14.32□□□□□ -0.12
LIG1-203ENST00000536218 NUP107P57740 925 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 SYCP2LQ5T4T6 812 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 WDR75Q8IWA0 830 aaKnown RBP14.32□□□□□ -0.12
LIG1-203ENST00000536218 TSPAN14Q8NG11 270 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 CAAP1Q9H8G2 361 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 C10orf88Q9H8K7 445 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 ATAD3AQ9NVI7 634 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 GNEQ9Y223 722 aaKnown RBP14.32□□□□□ -0.12
LIG1-203ENST00000536218 PPEF2O14830 753 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 CPA3P15088 417 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 ATXN3P54252 364 aaPredicted RBP14.32□□□□□ -0.12
LIG1-203ENST00000536218 ARPC4P59998 168 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 SPIDRQ14159 915 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 KATNAL2Q8IYT4 538 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 LINC01465Q8N7H1 131 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 BANPQ8N9N5 519 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 EXD1Q8NHP7 514 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 TMEM176AQ96HP8 235 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 ZNF512Q96ME7 567 aaPredicted RBP14.32□□□□□ -0.12
LIG1-203ENST00000536218 SLC38A7Q9NVC3 462 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 SLC24A2Q9UI40 661 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 POMPQ9Y244 141 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 KAT6AQ92794 2004 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 CD48P09326 243 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 RCVRNP35243 200 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 RGS7P49802 495 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 CDK9P50750 372 aaKnown RBP14.32□□□□□ -0.12
LIG1-203ENST00000536218 ARSEP51690 589 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 NDST1P52848 882 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 HUNKP57058 714 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 BEX3Q00994 111 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 CCL14Q16627 93 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 XKR5Q6UX68 686 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 CLVS1Q8IUQ0 354 aaPredicted RBP14.32□□□□□ -0.12
LIG1-203ENST00000536218 DEFB107AQ8IZN7 70 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 EBF4Q9BQW3 602 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 NFKBIZQ9BYH8 718 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 ZNF696Q9H7X3 374 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 KCNK4Q9NYG8 393 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 PLK2Q9NYY3 685 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 KLK14Q9P0G3 267 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 GIT1Q9Y2X7 761 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 SNX9Q9Y5X1 595 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 DOCK3Q8IZD9 2030 aa14.32□□□□□ -0.12
LIG1-203ENST00000536218 GOLGA8TH3BQL2 631 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 MCF2LO15068 1137 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 MED7O43513 233 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 ZMPSTE24O75844 475 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 MICAL2O94851 1124 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 ERBB2P04626 1255 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 AKAP5P24588 427 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 BCL2A1Q16548 175 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 HSF5Q4G112 596 aaPredicted RBP14.31□□□□□ -0.12
LIG1-203ENST00000536218 GRIN3AQ8TCU5 1115 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 SREK1Q8WXA9 508 aaKnown RBP14.31□□□□□ -0.12
LIG1-203ENST00000536218 STARD8Q92502 1023 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 NUF2Q9BZD4 464 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 ASB7Q9H672 318 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 DNPEPQ9ULA0 475 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 SIP14410 1827 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 TMX2-CTNND1H3BSU7 103 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 PCYT1AP49585 367 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 KLF1Q13351 362 aaPredicted RBP14.31□□□□□ -0.12
LIG1-203ENST00000536218 FAM187BQ17R55 369 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 FAM110CQ1W6H9 321 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 EGFLAMQ63HQ2 1017 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 CENPUQ71F23 418 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 PQLC1Q8N2U9 271 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 DNAJB3Q8WWF6 145 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 SLITRK1Q96PX8 696 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 LPIN3Q9BQK8 851 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 HAUS8Q9BT25 410 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 BCO2Q9BYV7 579 aa14.31□□□□□ -0.12
LIG1-203ENST00000536218 ZNF518BQ9C0D4 1074 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms