RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 APBA1Q02410 837 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 GFPT1Q06210 699 aaPredicted RBP11.17□□□□□ -0.62
CCDC60-202ENST00000535685 KCNMA1Q12791 1236 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 SLC12A1Q13621 1099 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 FNDC3BQ53EP0 1204 aaKnown RBP11.17□□□□□ -0.62
CCDC60-202ENST00000535685 DCAF6Q58WW2 860 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 ZC3H12AQ5D1E8 599 aaKnown RBP11.17□□□□□ -0.62
CCDC60-202ENST00000535685 N4BP2L1Q5TBK1 243 aaPredicted RBP11.17□□□□□ -0.62
CCDC60-202ENST00000535685 KLHDC7AQ5VTJ3 777 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 TTC39BQ5VTQ0 682 aaPredicted RBP11.17□□□□□ -0.62
CCDC60-202ENST00000535685 OLFML1Q6UWY5 402 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 LYPD8Q6UX82 237 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 C11orf57Q6ZUT1 292 aaPredicted RBP11.17□□□□□ -0.62
CCDC60-202ENST00000535685 MFN1Q8IWA4 741 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 ATP6V0D2Q8N8Y2 350 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 C1orf131Q8NDD1 294 aaKnown RBP11.17□□□□□ -0.62
CCDC60-202ENST00000535685 MYEOVQ96EZ4 313 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 TOE1Q96GM8 510 aaKnown RBP11.17□□□□□ -0.62
CCDC60-202ENST00000535685 ZDHHC5Q9C0B5 715 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 NUCKS1Q9H1E3 243 aaKnown RBP11.17□□□□□ -0.62
CCDC60-202ENST00000535685 CD93Q9NPY3 652 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 PLCB1Q9NQ66 1216 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 PRSS16Q9NQE7 514 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 RRN3Q9NYV6 651 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 KIAA1522Q9P206 1035 aaPredicted RBP11.17□□□□□ -0.62
CCDC60-202ENST00000535685 TJP2Q9UDY2 1190 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 SLC12A6Q9UHW9 1150 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 AJAP1Q9UKB5 411 aaPredicted RBP11.17□□□□□ -0.62
CCDC60-202ENST00000535685 INTS6Q9UL03 887 aaKnown RBP11.17□□□□□ -0.62
CCDC60-202ENST00000535685 SCML1Q9UN30 329 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 DAAM1Q9Y4D1 1078 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 USP24Q9UPU5 2620 aa11.17□□□□□ -0.62
CCDC60-202ENST00000535685 DOCK9Q9BZ29 2069 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 ITIH6Q6UXX5 1313 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 TP53BP1Q12888 1972 aaPredicted RBP11.16□□□□□ -0.62
CCDC60-202ENST00000535685 TARSL2A2RTX5 802 aaKnown RBP11.16□□□□□ -0.62
CCDC60-202ENST00000535685 GJB3O75712 270 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 SYPP08247 313 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 ACADMP11310 421 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 HLA-EP13747 358 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 GNSP15586 552 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 TACR2P21452 398 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 CCR1P32246 355 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 NOS2P35228 1153 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 PLK1P53350 603 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 OXCT1P55809 520 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 PITX1P78337 314 aaPredicted RBP11.16□□□□□ -0.62
CCDC60-202ENST00000535685 SLC6A3Q01959 620 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 SEMA3BQ13214 749 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 SLC14A1Q13336 389 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 KCNJ12Q14500 433 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 DRAP1Q14919 205 aaPredicted RBP11.16□□□□□ -0.62
CCDC60-202ENST00000535685 TAF5Q15542 800 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 HNRNPA1L2Q32P51 320 aaKnown RBP11.16□□□□□ -0.62
CCDC60-202ENST00000535685 C5orf22Q49AR2 442 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 PTPN20Q4JDL3 420 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 TCP11X2Q5H9J9 407 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 PIP4P1Q86T03 277 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 SLC47A2Q86VL8 602 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 CCDC117Q8IWD4 279 aaPredicted RBP11.16□□□□□ -0.62
CCDC60-202ENST00000535685 DEFB106AQ8N104 65 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 C1orf216Q8TAB5 229 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 ADAM32Q8TC27 787 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 CYB5D2Q8WUJ1 264 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 NT5C3BQ969T7 300 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 PGAP3Q96FM1 320 aaPredicted RBP11.16□□□□□ -0.62
CCDC60-202ENST00000535685 MRGPRX3Q96LB0 322 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 RSPH9Q9H1X1 276 aaPredicted RBP11.16□□□□□ -0.62
CCDC60-202ENST00000535685 OSGEPQ9NPF4 335 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 SAMSN1Q9NSI8 373 aaKnown RBP11.16□□□□□ -0.62
CCDC60-202ENST00000535685 DNAAF2Q9NVR5 837 aaKnown RBP11.16□□□□□ -0.62
CCDC60-202ENST00000535685 XPO7Q9UIA9 1087 aaKnown RBP11.16□□□□□ -0.62
CCDC60-202ENST00000535685 CEP83Q9Y592 693 aa11.16□□□□□ -0.62
CCDC60-202ENST00000535685 ARID1BQ8NFD5 2236 aaPredicted RBP11.16□□□□□ -0.62
CCDC60-202ENST00000535685 GOLGA4Q13439 2230 aaKnown RBP11.15□□□□□ -0.62
CCDC60-202ENST00000535685 A0A1B0GTW7 788 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 C10orf142B7Z368 130 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 F5H5T6 163 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 DAB1O75553 588 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 MOCS3O95396 460 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 ERBB2P04626 1255 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 CFIP05156 583 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 UCHL3P15374 230 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 CYP11B1P15538 503 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 CSKP41240 450 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 NOVA1P51513 510 aaKnown RBP11.15□□□□□ -0.62
CCDC60-202ENST00000535685 RPS14P62263 151 aaKnown RBP11.15□□□□□ -0.62
CCDC60-202ENST00000535685 SULT2A1Q06520 285 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 SFSWAPQ12872 951 aaKnown RBP11.15□□□□□ -0.62
CCDC60-202ENST00000535685 CDH18Q13634 790 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 HNRNPDQ14103 355 aaKnown RBP11.15□□□□□ -0.62
CCDC60-202ENST00000535685 PLEKHG6Q3KR16 790 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 FSCBQ5H9T9 825 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 PITRM1Q5JRX3 1037 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 ACBD5Q5T8D3 534 aaPredicted RBP11.15□□□□□ -0.62
CCDC60-202ENST00000535685 SH3PXD2AQ5TCZ1 1133 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 CDKAL1Q5VV42 579 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 PSAPL1Q6NUJ1 521 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 FAM183BPQ6ZVS7 135 aa11.15□□□□□ -0.62
CCDC60-202ENST00000535685 USP30Q70CQ3 517 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms