RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 NEK11Q8NG66 645 aa12.26□□□□□ -0.45
KNTC1-208ENST00000535410 GANCQ8TET4 914 aa12.26□□□□□ -0.45
KNTC1-208ENST00000535410 DNASE2BQ8WZ79 361 aa12.26□□□□□ -0.45
KNTC1-208ENST00000535410 PGAP3Q96FM1 320 aaPredicted RBP12.26□□□□□ -0.45
KNTC1-208ENST00000535410 GPR174Q9BXC1 333 aa12.26□□□□□ -0.45
KNTC1-208ENST00000535410 SLC6A17Q9H1V8 727 aa12.26□□□□□ -0.45
KNTC1-208ENST00000535410 SGK2Q9HBY8 427 aa12.26□□□□□ -0.45
KNTC1-208ENST00000535410 PRSS16Q9NQE7 514 aa12.26□□□□□ -0.45
KNTC1-208ENST00000535410 FAM207AQ9NSI2 230 aaPredicted RBP12.26□□□□□ -0.45
KNTC1-208ENST00000535410 TPX2Q9ULW0 747 aaKnown RBP12.26□□□□□ -0.45
KNTC1-208ENST00000535410 ERVW-1Q9UQF0 538 aa12.26□□□□□ -0.45
KNTC1-208ENST00000535410 EML5Q05BV3 1969 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 EDDM13A0A1B0GTR0 161 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 SMTNL1A8MU46 457 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 UPK3BL1B0FP48 263 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 UPK3BL2E5RIL1 263 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 ARHGAP33O14559 1287 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 CDX4O14627 284 aaPredicted RBP12.25□□□□□ -0.45
KNTC1-208ENST00000535410 OPHN1O60890 802 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 KCNK5O95279 499 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 PNMA6AP0CW24 399 aaPredicted RBP12.25□□□□□ -0.45
KNTC1-208ENST00000535410 SOX5P35711 763 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 MAPK8P45983 427 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 CXCR3P49682 368 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 NOVA1P51513 510 aaKnown RBP12.25□□□□□ -0.45
KNTC1-208ENST00000535410 POLR2FP61218 127 aaKnown RBP12.25□□□□□ -0.45
KNTC1-208ENST00000535410 UBXN1Q04323 297 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 DEUP1Q05D60 604 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 SLC14A1Q13336 389 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 AUHQ13825 339 aaKnown RBP12.25□□□□□ -0.45
KNTC1-208ENST00000535410 FAM102AQ5T9C2 384 aaPredicted RBP12.25□□□□□ -0.45
KNTC1-208ENST00000535410 TAF3Q5VWG9 929 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 FBXL22Q6P050 247 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 IL27RAQ6UWB1 636 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 DSG4Q86SJ6 1040 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 SLC41A1Q8IVJ1 513 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 CCAR2Q8N163 923 aaKnown RBP12.25□□□□□ -0.45
KNTC1-208ENST00000535410 WFDC5Q8TCV5 224 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 EPS8L1Q8TE68 723 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 LMLNQ96KR4 655 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 C1orf74Q96LT6 269 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 NPY6RQ99463 290 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 PRMT1Q99873 361 aaKnown RBP12.25□□□□□ -0.45
KNTC1-208ENST00000535410 GTPBP2Q9BX10 602 aaKnown RBP12.25□□□□□ -0.45
KNTC1-208ENST00000535410 RSPH9Q9H1X1 276 aaPredicted RBP12.25□□□□□ -0.45
KNTC1-208ENST00000535410 CAPN10Q9HC96 672 aa12.25□□□□□ -0.45
KNTC1-208ENST00000535410 LIMA1Q9UHB6 759 aaKnown RBP12.25□□□□□ -0.45
KNTC1-208ENST00000535410 XPO7Q9UIA9 1087 aaKnown RBP12.25□□□□□ -0.45
KNTC1-208ENST00000535410 AJAP1Q9UKB5 411 aaPredicted RBP12.25□□□□□ -0.45
KNTC1-208ENST00000535410 FARP1Q9Y4F1 1045 aaPredicted RBP12.25□□□□□ -0.45
KNTC1-208ENST00000535410 LGALS16A8MUM7 142 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 BCAT2O15382 392 aaPredicted RBP12.24□□□□□ -0.45
KNTC1-208ENST00000535410 GFPT2O94808 682 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 ZNF18P17022 549 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 DESP17661 470 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 SULT1E1P49888 294 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 VASPP50552 380 aaPredicted RBP12.24□□□□□ -0.45
KNTC1-208ENST00000535410 COPB1P53618 953 aaKnown RBP12.24□□□□□ -0.45
KNTC1-208ENST00000535410 CDH4P55283 916 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 RPS14P62263 151 aaKnown RBP12.24□□□□□ -0.45
KNTC1-208ENST00000535410 KRT83P78385 493 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 CDR2Q01850 454 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 CCDC15Q0P6D6 951 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 TEAD4Q15561 434 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 ARL13BQ3SXY8 428 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 FSCBQ5H9T9 825 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 DCAF12L1Q5VU92 463 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 PSAPL1Q6NUJ1 521 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 NOP9Q86U38 636 aaKnown RBP12.24□□□□□ -0.45
KNTC1-208ENST00000535410 FAM124AQ86V42 546 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 XYLT1Q86Y38 959 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 CPA5Q8WXQ8 436 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 NT5C3BQ969T7 300 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 SKA1Q96BD8 255 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 ATXN2Q99700 1313 aaKnown RBP12.24□□□□□ -0.45
KNTC1-208ENST00000535410 TKTL2Q9H0I9 626 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 SIK2Q9H0K1 926 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 MIR1-1HGQ9H1L0 117 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 RETREG1Q9H6L5 497 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 ARHGEF38Q9NXL2 777 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 SLC25A13Q9UJS0 675 aa12.24□□□□□ -0.45
KNTC1-208ENST00000535410 INTS6Q9UL03 887 aaKnown RBP12.24□□□□□ -0.45
KNTC1-208ENST00000535410 ITIH6Q6UXX5 1313 aa12.23□□□□□ -0.45
KNTC1-208ENST00000535410 LRRC72A6NJI9 287 aa12.23□□□□□ -0.45
KNTC1-208ENST00000535410 PAGE1O75459 146 aa12.23□□□□□ -0.45
KNTC1-208ENST00000535410 SEMA4FO95754 770 aa12.23□□□□□ -0.45
KNTC1-208ENST00000535410 ADH1BP00325 375 aa12.23□□□□□ -0.45
KNTC1-208ENST00000535410 MMEP08473 750 aa12.23□□□□□ -0.45
KNTC1-208ENST00000535410 PDGFRAP16234 1089 aa12.23□□□□□ -0.45
KNTC1-208ENST00000535410 C5AR1P21730 350 aa12.23□□□□□ -0.45
KNTC1-208ENST00000535410 NSFP46459 744 aaKnown RBP12.23□□□□□ -0.45
KNTC1-208ENST00000535410 PITX1P78337 314 aaPredicted RBP12.23□□□□□ -0.45
KNTC1-208ENST00000535410 ELAVL3Q14576 367 aaKnown RBP12.23□□□□□ -0.45
KNTC1-208ENST00000535410 C5orf22Q49AR2 442 aa12.23□□□□□ -0.45
KNTC1-208ENST00000535410 FILIP1LQ4L180 1135 aa12.23□□□□□ -0.45
KNTC1-208ENST00000535410 C6orf118Q5T5N4 469 aa12.23□□□□□ -0.45
KNTC1-208ENST00000535410 C9orf64Q5T6V5 341 aa12.23□□□□□ -0.45
KNTC1-208ENST00000535410 N4BP2L1Q5TBK1 243 aaPredicted RBP12.23□□□□□ -0.45
KNTC1-208ENST00000535410 SH3PXD2AQ5TCZ1 1133 aa12.23□□□□□ -0.45
KNTC1-208ENST00000535410 FAM46CQ5VWP2 391 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms