RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 RMDN3Q96TC7 470 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 WDR83Q9BRX9 315 aaKnown RBP5.69□□□□□ -1.5
PRKDC-205ENST00000535375 FAM234AQ9H0X4 552 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 ELAC1Q9H777 363 aaKnown RBP5.69□□□□□ -1.5
PRKDC-205ENST00000535375 FZD3Q9NPG1 666 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 DACT1Q9NYF0 836 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 PCDHA10Q9Y5I2 948 aa5.69□□□□□ -1.5
PRKDC-205ENST00000535375 COPG1Q9Y678 874 aaKnown RBP5.69□□□□□ -1.5
PRKDC-205ENST00000535375 FAM90A18PA6NE21 464 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 FAM90A16PA6NEW6 464 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 AGAP5A6NIR3 686 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 FAM90A9PA6NNJ1 464 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 FAM90A5PA8MXJ8 464 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 TRIM38O00635 465 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 INSIG1O15503 277 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 MSI1O43347 362 aaKnown RBP5.68□□□□□ -1.5
PRKDC-205ENST00000535375 OAZ2O95190 189 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 NTN1O95631 604 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 FAM90A15PP0C7V4 464 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 FAM90A14PP0C7W9 464 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 PDIA3P30101 505 aaKnown RBP5.68□□□□□ -1.5
PRKDC-205ENST00000535375 SERPINF1P36955 418 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 RCAN1P53805 252 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 BLMHQ13867 455 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 PTGR1Q14914 329 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 KIAA1755Q5JYT7 1200 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 TTC39AQ5SRH9 613 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 SLC44A2Q8IWA5 706 aaPredicted RBP5.68□□□□□ -1.5
PRKDC-205ENST00000535375 CLEC4CQ8WTT0 213 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 POF1BQ8WVV4 589 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 WACQ9BTA9 647 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 EBF3Q9H4W6 596 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 WDR26Q9H7D7 661 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 BAG5Q9UL15 447 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 PCDHA12Q9UN75 941 aa5.68□□□□□ -1.5
PRKDC-205ENST00000535375 MCIDASD6RGH6 385 aa5.67□□□□□ -1.5
PRKDC-205ENST00000535375 CSTBP04080 98 aaKnown RBP5.67□□□□□ -1.5
PRKDC-205ENST00000535375 TBXAS1P24557 533 aaPredicted RBP5.67□□□□□ -1.5
PRKDC-205ENST00000535375 STAT1P42224 750 aa5.67□□□□□ -1.5
PRKDC-205ENST00000535375 GALNT1Q10472 559 aaPredicted RBP5.67□□□□□ -1.5
PRKDC-205ENST00000535375 CHAF1AQ13111 956 aaPredicted RBP5.67□□□□□ -1.5
PRKDC-205ENST00000535375 MORC3Q14149 939 aa5.67□□□□□ -1.5
PRKDC-205ENST00000535375 CCDC38Q502W7 563 aa5.67□□□□□ -1.5
PRKDC-205ENST00000535375 HMBOX1Q6NT76 420 aa5.67□□□□□ -1.5
PRKDC-205ENST00000535375 LVRNQ6Q4G3 990 aa5.67□□□□□ -1.5
PRKDC-205ENST00000535375 KLBQ86Z14 1044 aa5.67□□□□□ -1.5
PRKDC-205ENST00000535375 C9orf106Q8NAJ2 232 aa5.67□□□□□ -1.5
PRKDC-205ENST00000535375 OR1N1Q8NGS0 311 aa5.67□□□□□ -1.5
PRKDC-205ENST00000535375 ATP2A3Q93084 1043 aa5.67□□□□□ -1.5
PRKDC-205ENST00000535375 EME1Q96AY2 570 aa5.67□□□□□ -1.5
PRKDC-205ENST00000535375 C3orf49Q96BT1 292 aa5.67□□□□□ -1.5
PRKDC-205ENST00000535375 TASP1Q9H6P5 420 aa5.67□□□□□ -1.5
PRKDC-205ENST00000535375 PRDM8Q9NQV8 689 aa5.67□□□□□ -1.5
PRKDC-205ENST00000535375 ZBTB40Q9NUA8 1239 aa5.67□□□□□ -1.5
PRKDC-205ENST00000535375 NDUFAF4Q9P032 175 aa5.67□□□□□ -1.5
PRKDC-205ENST00000535375 DAPP1Q9UN19 280 aa5.67□□□□□ -1.5
PRKDC-205ENST00000535375 C19orf53Q9UNZ5 99 aaPredicted RBP5.67□□□□□ -1.5
PRKDC-205ENST00000535375 CXorf65A6NEN9 183 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 EPN2O95208 641 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 LCKP06239 509 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 CHRNB1P11230 501 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 CDC25AP30304 524 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 CHRNA5P30532 468 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 KCNJ4P48050 445 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 CDK7P50613 346 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 ADPRHP54922 357 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 FOXG1P55316 489 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-205ENST00000535375 PMPCAQ10713 525 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 MAPK7Q13164 816 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 ARL13AQ5H913 290 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-205ENST00000535375 ANKS1BQ7Z6G8 1248 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 SPICE1Q8N0Z3 855 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 TMEM174Q8WUU8 243 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 LPAR1Q92633 364 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 MSI2Q96DH6 328 aaKnown RBP5.66□□□□□ -1.5
PRKDC-205ENST00000535375 PDE11AQ9HCR9 933 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 TXNRD2Q9NNW7 524 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 SLC25A13Q9UJS0 675 aa5.66□□□□□ -1.5
PRKDC-205ENST00000535375 FOXO6A8MYZ6 492 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 ACKR2O00590 384 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 WNT1P04628 370 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 PPATQ06203 517 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 TRIM14Q14142 442 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 ALG10Q5BKT4 473 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 ALG10BQ5I7T1 473 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 SULT6B1Q6IMI4 303 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 MDGA2Q7Z553 956 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 IGFN1Q86VF2 1251 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 ENDOVQ8N8Q3 282 aaKnown RBP5.65□□□□□ -1.5
PRKDC-205ENST00000535375 EXD3Q8N9H8 876 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 SCAMP5Q8TAC9 235 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 IP6K1Q92551 441 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 KAT2AQ92830 837 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 ZNF419Q96HQ0 510 aaPredicted RBP5.65□□□□□ -1.5
PRKDC-205ENST00000535375 TRAPPC9Q96Q05 1148 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 PIGSQ96S52 555 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 PABPC3Q9H361 631 aaKnown RBP5.65□□□□□ -1.5
PRKDC-205ENST00000535375 SEPSECSQ9HD40 501 aaKnown RBP5.65□□□□□ -1.5
PRKDC-205ENST00000535375 TAGLN3Q9UI15 199 aa5.65□□□□□ -1.5
PRKDC-205ENST00000535375 FBXO4Q9UKT5 387 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms