RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 KBTBD12Q3ZCT8 623 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 RNF168Q8IYW5 571 aaPredicted RBP13.74□□□□□ -0.21
BEST1-208ENST00000534553 CCDC33Q8N5R6 958 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 RTL3Q8N8U3 475 aaKnown RBP13.74□□□□□ -0.21
BEST1-208ENST00000534553 FBXO22Q8NEZ5 403 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 CKAP2Q8WWK9 683 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 CDKL2Q92772 493 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 TTC17Q96AE7 1141 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 CFAP36Q96G28 342 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 TEKT5Q96M29 485 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 MAGEB18Q96M61 343 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 SEPT5Q99719 369 aaPredicted RBP13.74□□□□□ -0.21
BEST1-208ENST00000534553 SIK2Q9H0K1 926 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 AAR2Q9Y312 384 aaKnown RBP13.74□□□□□ -0.21
BEST1-208ENST00000534553 TTLL3Q9Y4R7 772 aa13.74□□□□□ -0.21
BEST1-208ENST00000534553 CEP350Q5VT06 3117 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 MYO16Q9Y6X6 1858 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 MAGEB16A2A368 324 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 KCNK1O00180 336 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 MSI1O43347 362 aaKnown RBP13.73□□□□□ -0.21
BEST1-208ENST00000534553 KRT38O76015 456 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 ALDH1A2O94788 518 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 ZDHHC11BP0C7U3 371 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 GPR15P49685 360 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 MNX1P50219 401 aaPredicted RBP13.73□□□□□ -0.21
BEST1-208ENST00000534553 ARPP19P56211 112 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 ANO4Q32M45 955 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 SYCP2LQ5T4T6 812 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 TTC39BQ5VTQ0 682 aaPredicted RBP13.73□□□□□ -0.21
BEST1-208ENST00000534553 ARMC3Q5W041 872 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 RNF19BQ6ZMZ0 732 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 UNC5AQ6ZN44 842 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 YTHDF3Q7Z739 585 aaKnown RBP13.73□□□□□ -0.21
BEST1-208ENST00000534553 DEFB128Q7Z7B8 93 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 LINC00523Q86TU6 105 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 KLHDC8BQ8IXV7 354 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 ANKS4BQ8N8V4 417 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 ANKRD42Q8N9B4 389 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 LRRN4Q8WUT4 740 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 DPF3Q92784 378 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 IGSF21Q96ID5 467 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 UBE2OQ9C0C9 1292 aaKnown RBP13.73□□□□□ -0.21
BEST1-208ENST00000534553 LRRC40Q9H9A6 602 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 TMEM39AQ9NV64 488 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 OSER1Q9NX31 292 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 SAMD15Q9P1V8 674 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 HS3ST4Q9Y661 456 aa13.73□□□□□ -0.21
BEST1-208ENST00000534553 ARHGAP42A6NI28 874 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 FAM159BA6NKW6 160 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 TYROBPO43914 113 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 CACNG3O60359 315 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 MYCP01106 439 aaPredicted RBP13.72□□□□□ -0.21
BEST1-208ENST00000534553 CLTBP09497 229 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 RHOQP17081 205 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 KRT4P19013 534 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 DRD4P21917 467 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 CA4P22748 312 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 IFNAR2P48551 515 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 TUBP50607 506 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 NDST2P52849 883 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 USP46P62068 366 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 TAF10Q12962 218 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 FRG1Q14331 258 aaKnown RBP13.72□□□□□ -0.21
BEST1-208ENST00000534553 PSMD5Q16401 504 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 AFMIDQ63HM1 303 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 TPGS2Q68CL5 300 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 NAPEPLDQ6IQ20 393 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 KIAA1841Q6NSI8 718 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 TAX1BP1Q86VP1 789 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 CACNA2D3Q8IZS8 1091 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 AGGF1Q8N302 714 aaeCLIP13.72□□□□□ -0.21
BEST1-208ENST00000534553 MZB1Q8WU39 189 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 ZYG11BQ9C0D3 744 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 BFARQ9NZS9 450 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 AFF4Q9UHB7 1163 aaKnown RBP13.72□□□□□ -0.21
BEST1-208ENST00000534553 HBS1LQ9Y450 684 aaKnown RBP13.72□□□□□ -0.21
BEST1-208ENST00000534553 CDY1Q9Y6F8 540 aa13.72□□□□□ -0.21
BEST1-208ENST00000534553 FNDC1Q4ZHG4 1894 aaPredicted RBP13.72□□□□□ -0.21
BEST1-208ENST00000534553 IGLV3-10A0A075B6K4 115 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 NT5C1B-RDH14C9J2C7 533 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 MATN3O15232 486 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 ANXA9O76027 345 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 IGLV3-27P01718 113 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 C1QAP02745 245 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 MT-ND3P03897 115 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 SOD2P04179 222 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 POLBP06746 335 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 SNRPAP09012 282 aaKnown RBP13.71□□□□□ -0.21
BEST1-208ENST00000534553 CREB1P16220 341 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 DUSP4Q13115 394 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 DNAJC3Q13217 504 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 MTM1Q13496 603 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 SPANXN3Q5MJ09 141 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 SDHAF4Q5VUM1 108 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 KLHDC10Q6PID8 442 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 RGS9BPQ6ZS82 235 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 CTAGE3PQ8IX95 158 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 UMODL1-AS1Q8N2C9 162 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 DENND1AQ8TEH3 1009 aa13.71□□□□□ -0.21
BEST1-208ENST00000534553 TOP1MTQ969P6 601 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms