RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 TUBGCP2Q9BSJ2 902 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 SYNCQ9H7C4 482 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 IL21RQ9HBE5 538 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 SGK2Q9HBY8 427 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 ASNSD1Q9NWL6 643 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 FBXL12Q9NXK8 326 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 AJAP1Q9UKB5 411 aaPredicted RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 SCML1Q9UN30 329 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 SLCO1B1Q9Y6L6 691 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 MYO18AQ92614 2054 aaKnown RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 LAMA1P25391 3075 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 A0A1B0GVT2 93 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 FAM47DPA6NHR8 397 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 PES1O00541 588 aaKnown RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 HYAL3O43820 417 aaPredicted RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 TRIM16O95361 564 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 ERBB2P04626 1255 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 NOS2P35228 1153 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 NNMTP40261 264 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 MATKP42679 507 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 NUMBP49757 651 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 BNC1Q01954 994 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 NME3Q13232 169 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 SLC12A1Q13621 1099 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 CST6Q15828 149 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 MIIPQ5JXC2 388 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 RABGAP1LQ5R372 815 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 FBXL22Q6P050 247 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 IL27RAQ6UWB1 636 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 OLFML1Q6UWY5 402 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 UNQ6494/PRO21346Q6UXR6 183 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 FAM183BPQ6ZVS7 135 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 MMAAQ8IVH4 418 aaKnown RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 FAM71AQ8IYT1 594 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 RPRD1AQ96P16 312 aaPredicted RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 PPP1R9BQ96SB3 815 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 FAM129BQ96TA1 746 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 ADAM33Q9BZ11 813 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 NUP62CLQ9H1M0 184 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 PDCL3Q9H2J4 239 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 PABPC3Q9H361 631 aaKnown RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 OSGEPQ9NPF4 335 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 PLCB1Q9NQ66 1216 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 TM7SF3Q9NS93 570 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 DACH1Q9UI36 760 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 GON4LQ3T8J9 2241 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 CHD8Q9HCK8 2581 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 EDDM13A0A1B0GTR0 161 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 A0A1B0GVM2 712 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 TCAF2A6NFQ2 919 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 M0QYT0 321 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 MID1O15344 667 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 RNASEH2AO75792 299 aaKnown RBP9.19□□□□□ -0.94
COPB1-211ENST00000534234 CER1O95813 267 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 ZNF883P0CG24 379 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 PDGFRAP16234 1089 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 CD27P26842 260 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 MZF1P28698 734 aaPredicted RBP9.19□□□□□ -0.94
COPB1-211ENST00000534234 SLC8A1P32418 973 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 STK19P49842 368 aaPredicted RBP9.19□□□□□ -0.94
COPB1-211ENST00000534234 GALCP54803 685 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 OXCT1P55809 520 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 RNASE9P60153 205 aaKnown RBP9.19□□□□□ -0.94
COPB1-211ENST00000534234 SULT2A1Q06520 285 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 KCNMA1Q12791 1236 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 MTA1Q13330 715 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 AUHQ13825 339 aaKnown RBP9.19□□□□□ -0.94
COPB1-211ENST00000534234 RAPGEF1Q13905 1077 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 DRAP1Q14919 205 aaPredicted RBP9.19□□□□□ -0.94
COPB1-211ENST00000534234 TEAD4Q15561 434 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 KIF19Q2TAC6 998 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 PTPN20Q4JDL3 420 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 KLHDC7AQ5VTJ3 777 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 TTC39BQ5VTQ0 682 aaPredicted RBP9.19□□□□□ -0.94
COPB1-211ENST00000534234 DPY19L2P1Q6NXN4 242 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 SLC26A9Q7LBE3 791 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 CIR1Q86X95 450 aaPredicted RBP9.19□□□□□ -0.94
COPB1-211ENST00000534234 ZDHHC17Q8IUH5 632 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 NAXDQ8IW45 347 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 CHCHD4Q8N4Q1 142 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 TMEM35BQ8NCS4 154 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 ZNF397Q8NF99 534 aaPredicted RBP9.19□□□□□ -0.94
COPB1-211ENST00000534234 SETD7Q8WTS6 366 aaKnown RBP9.19□□□□□ -0.94
COPB1-211ENST00000534234 PTPRN2Q92932 1015 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 IGSF8Q969P0 613 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 OMDQ99983 421 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 SIK2Q9H0K1 926 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 NEUROG2Q9H2A3 272 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 TM9SF3Q9HD45 589 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 SAMSN1Q9NSI8 373 aaKnown RBP9.19□□□□□ -0.94
COPB1-211ENST00000534234 SERGEFQ9UGK8 458 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 VANGL2Q9ULK5 521 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 ANKRD6Q9Y2G4 727 aa9.19□□□□□ -0.94
COPB1-211ENST00000534234 ITIH6Q6UXX5 1313 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.18□□□□□ -0.94
COPB1-211ENST00000534234 A0A1W2PP55 124 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 KCNK3O14649 394 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 PAGE1O75459 146 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 IGHV4-34P06331 123 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 CYP11B1P15538 503 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms