RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 TMEM196Q5HYL7 178 aa16.04■□□□□ 0.16
CTTN-215ENST00000533931 RWDD4Q6NW29 188 aaKnown RBP16.04■□□□□ 0.16
CTTN-215ENST00000533931 TPRG1Q6ZUI0 275 aa16.04■□□□□ 0.16
CTTN-215ENST00000533931 CFAP52Q8N1V2 620 aa16.04■□□□□ 0.16
CTTN-215ENST00000533931 LZTR1Q8N653 840 aa16.04■□□□□ 0.16
CTTN-215ENST00000533931 RTL3Q8N8U3 475 aaKnown RBP16.04■□□□□ 0.16
CTTN-215ENST00000533931 KCTD6Q8NC69 237 aa16.04■□□□□ 0.16
CTTN-215ENST00000533931 KCNV2Q8TDN2 545 aa16.04■□□□□ 0.16
CTTN-215ENST00000533931 FAM3CQ92520 227 aa16.04■□□□□ 0.16
CTTN-215ENST00000533931 TRIM44Q96DX7 344 aaPredicted RBP16.04■□□□□ 0.16
CTTN-215ENST00000533931 HES6Q96HZ4 224 aa16.04■□□□□ 0.16
CTTN-215ENST00000533931 RBM41Q96IZ5 413 aaKnown RBP16.04■□□□□ 0.16
CTTN-215ENST00000533931 CSPG4P5Q96PW8 444 aa16.04■□□□□ 0.16
CTTN-215ENST00000533931 GOLPH3Q9H4A6 298 aa16.04■□□□□ 0.16
CTTN-215ENST00000533931 GPATCH2LQ9NWQ4 482 aa16.04■□□□□ 0.16
CTTN-215ENST00000533931 CWC15Q9P013 229 aaKnown RBP16.04■□□□□ 0.16
CTTN-215ENST00000533931 KIAA1522Q9P206 1035 aaPredicted RBP16.04■□□□□ 0.16
CTTN-215ENST00000533931 SNX10Q9Y5X0 201 aa16.04■□□□□ 0.16
CTTN-215ENST00000533931 TTC28Q96AY4 2481 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 ILVBLA1L0T0 632 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 KRBA1A5PL33 1030 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 SHISA7A6NL88 538 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 H0Y626 953 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 TIMM44O43615 452 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 CREB3O43889 395 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 KIF5CO60282 957 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 ZRANB2O95218 330 aaKnown RBP eCLIP16.03■□□□□ 0.16
CTTN-215ENST00000533931 GOT1P17174 413 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 KDELR1P24390 212 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 PTPN7P35236 360 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 TNFRSF4P43489 277 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 PEX5P50542 639 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 RWDD2BP57060 319 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 FBXO43Q4G163 708 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 ALFQ53S48 1182 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 ODF2Q5BJF6 829 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 CXorf57Q6NSI4 855 aaKnown RBP16.03■□□□□ 0.16
CTTN-215ENST00000533931 TRIM67Q6ZTA4 783 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 ANKS1BQ7Z6G8 1248 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 C12orf40Q86WS4 652 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 RCOR2Q8IZ40 523 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 AHI1Q8N157 1196 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 UMODL1-AS1Q8N2C9 162 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 SYNPOQ8N3V7 929 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 TERB1Q8NA31 727 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 LMLNQ96KR4 655 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 ARHGEF4Q9NR80 690 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 PLK2Q9NYY3 685 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 EFR3BQ9Y2G0 817 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 HYOU1Q9Y4L1 999 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 TICRRQ7Z2Z1 1910 aa16.03■□□□□ 0.16
CTTN-215ENST00000533931 KANSL1LA0AUZ9 987 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 LRRD1A4D1F6 860 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 C3orf70A6NLC5 250 aaPredicted RBP16.02■□□□□ 0.16
CTTN-215ENST00000533931 NPC1O15118 1278 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 DAPK3O43293 454 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 CNTN5O94779 1100 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 KRT1P04264 644 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 APODP05090 189 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 IL4RP24394 825 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 OR1E1P30953 314 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 CETN2P41208 172 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 SOX9P48436 509 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 IRAK1P51617 712 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 NDST2P52849 883 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 YBEYP58557 167 aaPredicted RBP16.02■□□□□ 0.16
CTTN-215ENST00000533931 GRSF1Q12849 480 aaKnown RBP eCLIP16.02■□□□□ 0.16
CTTN-215ENST00000533931 PPP2R5EQ16537 467 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 DGKKQ5KSL6 1271 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 MEI1Q5TIA1 1274 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 TXNDC11Q6PKC3 985 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 SIX5Q8N196 739 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 ZNF687Q8N1G0 1237 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 CARNMT1Q8N4J0 409 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 TTC8Q8TAM2 541 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 BHMTQ93088 406 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 CALN1Q9BXU9 219 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 MAGEB5Q9BZ81 275 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 MAGEH1Q9H213 219 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 MPP6Q9NZW5 540 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 GGA2Q9UJY4 613 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 CA14Q9ULX7 337 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 STARD13Q9Y3M8 1113 aa16.02■□□□□ 0.16
CTTN-215ENST00000533931 NCOR1O75376 2440 aa16.02■□□□□ 0.15
CTTN-215ENST00000533931 KIAA1549LQ6ZVL6 1849 aa16.01■□□□□ 0.15
CTTN-215ENST00000533931 DCLK1O15075 740 aa16.01■□□□□ 0.15
CTTN-215ENST00000533931 KAT7O95251 611 aa16.01■□□□□ 0.15
CTTN-215ENST00000533931 RHOCP08134 193 aa16.01■□□□□ 0.15
CTTN-215ENST00000533931 PABPC1P11940 636 aaKnown RBP16.01■□□□□ 0.15
CTTN-215ENST00000533931 ZFXP17010 805 aaPredicted RBP16.01■□□□□ 0.15
CTTN-215ENST00000533931 ERCC2P18074 760 aa16.01■□□□□ 0.15
CTTN-215ENST00000533931 HLA-FP30511 346 aa16.01■□□□□ 0.15
CTTN-215ENST00000533931 SERPINB6P35237 376 aa16.01■□□□□ 0.15
CTTN-215ENST00000533931 GJC1P36383 396 aa16.01■□□□□ 0.15
CTTN-215ENST00000533931 VASPP50552 380 aaPredicted RBP16.01■□□□□ 0.15
CTTN-215ENST00000533931 GALK1P51570 392 aa16.01■□□□□ 0.15
CTTN-215ENST00000533931 LRRC32Q14392 662 aa16.01■□□□□ 0.15
CTTN-215ENST00000533931 PARP15Q460N3 678 aa16.01■□□□□ 0.15
CTTN-215ENST00000533931 ATP13A4Q4VNC1 1196 aa16.01■□□□□ 0.15
CTTN-215ENST00000533931 ZFYVE27Q5T4F4 411 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms