RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TMCC1O94876 653 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 SERPINE1P05121 402 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 TPSB2P20231 275 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 MAGEA6P43360 314 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 CCR10P46092 362 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 SEMA5AQ13591 1074 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 CCNIQ14094 377 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 TPSAB1Q15661 275 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 DHDDSQ86SQ9 333 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 APOBEC3FQ8IUX4 373 aaKnown RBP19.81■□□□□ 0.76
CAPN1-226ENST00000533820 RNF148Q8N7C7 305 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 ARNTL2Q8WYA1 636 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 A0A0A0MRY4 1105 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 SERPINB5P36952 375 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 ARL4AP40617 200 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 KCTD2Q14681 263 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 DPYSL2Q16555 572 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 DCAF6Q58WW2 860 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 PID1Q7Z2X4 250 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 ZNF781Q8N8C0 355 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 OR52K1Q8NGK4 314 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 OR6Y1Q8NGX8 325 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 HIC2Q96JB3 615 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 SPATA13Q96N96 652 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 UNKQ9C0B0 810 aaKnown RBP19.81■□□□□ 0.76
CAPN1-226ENST00000533820 FAM49AQ9H0Q0 323 aaPredicted RBP19.81■□□□□ 0.76
CAPN1-226ENST00000533820 ERAP1Q9NZ08 941 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 KLK14Q9P0G3 267 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 ITGA11Q9UKX5 1188 aa19.81■□□□□ 0.76
CAPN1-226ENST00000533820 MRPL42Q9Y6G3 142 aaKnown RBP19.81■□□□□ 0.76
CAPN1-226ENST00000533820 BUD23O43709 281 aaKnown RBP19.8■□□□□ 0.76
CAPN1-226ENST00000533820 PRKCGP05129 697 aa19.8■□□□□ 0.76
CAPN1-226ENST00000533820 ALOX15P16050 662 aaPredicted RBP19.8■□□□□ 0.76
CAPN1-226ENST00000533820 IRF9Q00978 393 aa19.8■□□□□ 0.76
CAPN1-226ENST00000533820 PLOD1Q02809 727 aaPredicted RBP19.8■□□□□ 0.76
CAPN1-226ENST00000533820 GDPD5Q8WTR4 605 aa19.8■□□□□ 0.76
CAPN1-226ENST00000533820 MKS1Q9NXB0 559 aa19.8■□□□□ 0.76
CAPN1-226ENST00000533820 COPG2Q9UBF2 871 aa19.8■□□□□ 0.76
CAPN1-226ENST00000533820 CDH22Q9UJ99 828 aa19.8■□□□□ 0.76
CAPN1-226ENST00000533820 PAIP2BQ9ULR5 123 aaKnown RBP19.8■□□□□ 0.76
CAPN1-226ENST00000533820 AIM2O14862 343 aa19.8■□□□□ 0.76
CAPN1-226ENST00000533820 ATP9BO43861 1147 aa19.8■□□□□ 0.76
CAPN1-226ENST00000533820 RAG1P15918 1043 aa19.8■□□□□ 0.76
CAPN1-226ENST00000533820 DLG1Q12959 904 aa19.8■□□□□ 0.76
CAPN1-226ENST00000533820 ZNF669Q96BR6 464 aaPredicted RBP19.8■□□□□ 0.76
CAPN1-226ENST00000533820 CORO1BQ9BR76 489 aa19.8■□□□□ 0.76
CAPN1-226ENST00000533820 DPYSL4O14531 572 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 ZBTB14O43829 449 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 HSPA4LO95757 839 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 PENKP01210 267 aaPredicted RBP19.79■□□□□ 0.76
CAPN1-226ENST00000533820 CPA3P15088 417 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 TMED1Q13445 227 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 SLC9B1Q4ZJI4 515 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 NAPRTQ6XQN6 538 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 DCLK2Q8N568 766 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 MAPK15Q8TD08 544 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 FCRL3Q96P31 734 aaPredicted RBP19.79■□□□□ 0.76
CAPN1-226ENST00000533820 PRDM12Q9H4Q4 367 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 WDR55Q9H6Y2 383 aaPredicted RBP19.79■□□□□ 0.76
CAPN1-226ENST00000533820 POLR2AP24928 1970 aaKnown RBP19.79■□□□□ 0.76
CAPN1-226ENST00000533820 TSPAN1O60635 241 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 GSTA2P09210 222 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 AKAP5P24588 427 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 ABCE1P61221 599 aaKnown RBP19.79■□□□□ 0.76
CAPN1-226ENST00000533820 NIPAL4Q0D2K0 466 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 TBL3Q12788 808 aaKnown RBP19.79■□□□□ 0.76
CAPN1-226ENST00000533820 PKDCCQ504Y2 493 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 SPNS2Q8IVW8 549 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 EXOC8Q8IYI6 725 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 DEFB106AQ8N104 65 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 COG4Q9H9E3 785 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 SNX15Q9NRS6 342 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 UBP1Q9NZI7 540 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 TMEM221A6NGB7 291 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 E2F6O75461 281 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 KLHL2O95198 593 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 TPH1P17752 444 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 SULT1E1P49888 294 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 MARK2Q7KZI7 788 aaKnown RBP19.79■□□□□ 0.76
CAPN1-226ENST00000533820 DNAAF3Q8N9W5 541 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 ACVR1CQ8NER5 493 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 SLC2A14Q8TDB8 520 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 VRTNQ9H8Y1 702 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 GOLGA2P5Q9HBQ8 144 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 POMPQ9Y244 141 aa19.79■□□□□ 0.76
CAPN1-226ENST00000533820 LGALS2P05162 132 aa19.78■□□□□ 0.76
CAPN1-226ENST00000533820 ITGAXP20702 1163 aa19.78■□□□□ 0.76
CAPN1-226ENST00000533820 CRABP2P29373 138 aa19.78■□□□□ 0.76
CAPN1-226ENST00000533820 HSP90AA5PQ58FG0 334 aa19.78■□□□□ 0.76
CAPN1-226ENST00000533820 TMCO4Q5TGY1 634 aa19.78■□□□□ 0.76
CAPN1-226ENST00000533820 STRA8Q7Z7C7 330 aa19.78■□□□□ 0.76
CAPN1-226ENST00000533820 AFG1LQ8WV93 481 aa19.78■□□□□ 0.76
CAPN1-226ENST00000533820 DCDC2Q9UHG0 476 aa19.78■□□□□ 0.76
CAPN1-226ENST00000533820 KIAA1257Q9ULG3 409 aa19.78■□□□□ 0.76
CAPN1-226ENST00000533820 TBCCQ15814 346 aa19.78■□□□□ 0.76
CAPN1-226ENST00000533820 GCNAQ96QF7 691 aa19.78■□□□□ 0.76
CAPN1-226ENST00000533820 OR52B2Q96RD2 323 aa19.78■□□□□ 0.76
CAPN1-226ENST00000533820 EIF2AQ9BY44 585 aaKnown RBP19.78■□□□□ 0.76
CAPN1-226ENST00000533820 PDP2Q9P2J9 529 aa19.78■□□□□ 0.76
CAPN1-226ENST00000533820 CSADQ9Y600 493 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms