RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 CYTH4Q9UIA0 394 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 DMTF1Q9Y222 760 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 DOPEY2Q9Y3R5 2298 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 FLNCQ14315 2725 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 AHCTF1Q8WYP5 2266 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 COL27A1Q8IZC6 1860 aaPredicted RBP8.09□□□□□ -1.11
NXF1-215ENST00000533440 TBC1D3DA0A087WVF3 549 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 TBC1D3IA0A087WXS9 549 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 TBC1D3EA0A087X179 549 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 TBC1D3KA0A087X1G2 549 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 LY6G6EA0A0G2JKS1 128 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 EDDM13A0A1B0GTR0 161 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 TBC1D3FA6NER0 549 aaPredicted RBP8.09□□□□□ -1.11
NXF1-215ENST00000533440 TTC34A8MYJ7 566 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 TBC1D3LB9A6J9 549 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 IKBKBO14920 756 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 IRAK2O43187 625 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 TBL1XO60907 577 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 CD2BP2O95400 341 aaKnown RBP8.09□□□□□ -1.11
NXF1-215ENST00000533440 ZBED1O96006 694 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 SRPRAP08240 638 aaKnown RBP8.09□□□□□ -1.11
NXF1-215ENST00000533440 TBC1D3HP0C7X1 549 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 PSMD8P48556 350 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 TKTL1P51854 596 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 NFATC3Q12968 1075 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 SLC39A14Q15043 492 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 RABEP1Q15276 862 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 ARL13BQ3SXY8 428 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 FAM133BQ5BKY9 247 aaKnown RBP8.09□□□□□ -1.11
NXF1-215ENST00000533440 TBC1D3GQ6DHY5 549 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 TBC1D3CQ6IPX1 549 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 FAM173BQ6P4H8 233 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 RFWD3Q6PCD5 774 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 XKR5Q6UX68 686 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 MFN1Q8IWA4 741 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 TBC1D3Q8IZP1 549 aaPredicted RBP8.09□□□□□ -1.11
NXF1-215ENST00000533440 GOLGA5Q8TBA6 731 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 TMC2Q8TDI7 906 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 NDRG1Q92597 394 aaKnown RBP8.09□□□□□ -1.11
NXF1-215ENST00000533440 PTPRN2Q92932 1015 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 CCDC97Q96F63 343 aaPredicted RBP8.09□□□□□ -1.11
NXF1-215ENST00000533440 PRR11Q96HE9 360 aaPredicted RBP8.09□□□□□ -1.11
NXF1-215ENST00000533440 ULBP1Q9BZM6 244 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 TRIM4Q9C037 500 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 FAM117AQ9C073 453 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 STARD5Q9NSY2 213 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 UCKL1Q9NWZ5 548 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 SFMBT1Q9UHJ3 866 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 ERVW-1Q9UQF0 538 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 PCDHGA8Q9Y5G5 932 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 HEMK1Q9Y5R4 338 aaPredicted RBP8.09□□□□□ -1.11
NXF1-215ENST00000533440 U3KQA8 63 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 UNC79Q9P2D8 2635 aa8.09□□□□□ -1.11
NXF1-215ENST00000533440 TLN1Q9Y490 2541 aaKnown RBP8.08□□□□□ -1.12
NXF1-215ENST00000533440 GOLGA6L7A0A1B0GV03 622 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 CDRT15L2A8MXV6 281 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 PRAMEF26H0Y7S4 382 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 SLC7A4O43246 635 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 SUV39H1O43463 412 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 PLRG1O43660 514 aaKnown RBP8.08□□□□□ -1.12
NXF1-215ENST00000533440 PIAS2O75928 621 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 IGLV3-27P01718 113 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 CD58P19256 250 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 MZF1P28698 734 aaPredicted RBP8.08□□□□□ -1.12
NXF1-215ENST00000533440 SLC6A4P31645 630 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 PIK3CAP42336 1068 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 CTSOP43234 321 aaPredicted RBP8.08□□□□□ -1.12
NXF1-215ENST00000533440 CEBPZQ03701 1054 aaKnown RBP8.08□□□□□ -1.12
NXF1-215ENST00000533440 CLN3Q13286 438 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 STAT4Q14765 748 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 ISXQ2M1V0 245 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 LINC00303Q3SY05 128 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 HS1BP3Q53T59 392 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 PITRM1Q5JRX3 1037 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 BSPRYQ5W0U4 402 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 ARHGAP17Q68EM7 881 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.08□□□□□ -1.12
NXF1-215ENST00000533440 CCDC81Q6ZN84 652 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 ATG14Q6ZNE5 492 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 TMC6Q7Z403 805 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 TRIM69Q86WT6 500 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 STK40Q8N2I9 435 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 ANKRD52Q8NB46 1076 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 RNF139Q8WU17 664 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 AZIN2Q96A70 460 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 GRAMD1AQ96CP6 724 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 KLHDC7BQ96G42 594 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 APOLD1Q96LR9 279 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 HEXIM2Q96MH2 286 aaKnown RBP8.08□□□□□ -1.12
NXF1-215ENST00000533440 USP28Q96RU2 1077 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 DNAI2Q9GZS0 605 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 NIF3L1Q9GZT8 377 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 USP29Q9HBJ7 922 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 SLC39A2Q9NP94 309 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 KLHL11Q9NVR0 708 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 SLCO3A1Q9UIG8 710 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 SATB2Q9UPW6 733 aa8.08□□□□□ -1.12
NXF1-215ENST00000533440 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.08□□□□□ -1.12
NXF1-215ENST00000533440 DOCK9Q9BZ29 2069 aa8.07□□□□□ -1.12
NXF1-215ENST00000533440 NYNRINQ9P2P1 1898 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms