RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 SAE1Q9UBE0 346 aaPredicted RBP15.21■□□□□ 0.03
NXF1-214ENST00000533048 DRG1Q9Y295 367 aaKnown RBP15.21■□□□□ 0.03
NXF1-214ENST00000533048 USP15Q9Y4E8 981 aaPredicted RBP15.21■□□□□ 0.03
NXF1-214ENST00000533048 SLC9A3R1O14745 358 aaPredicted RBP15.2■□□□□ 0.02
NXF1-214ENST00000533048 MCF2LO15068 1137 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 CLDN11O75508 207 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 ZNF189O75820 626 aaPredicted RBP15.2■□□□□ 0.02
NXF1-214ENST00000533048 FOSL2P15408 326 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 SGSHP51688 502 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 NDST2P52849 883 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 RPS24P62847 133 aaKnown RBP15.2■□□□□ 0.02
NXF1-214ENST00000533048 ZNF33AQ06730 810 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 GALNT2Q10471 571 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 SMAD4Q13485 552 aaKnown RBP15.2■□□□□ 0.02
NXF1-214ENST00000533048 BYSLQ13895 437 aaKnown RBP15.2■□□□□ 0.02
NXF1-214ENST00000533048 DHX34Q14147 1143 aaKnown RBP15.2■□□□□ 0.02
NXF1-214ENST00000533048 C1orf228Q6PIY5 440 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 CCDC137Q6PK04 289 aaKnown RBP15.2■□□□□ 0.02
NXF1-214ENST00000533048 NPNTQ6UXI9 565 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 ARHGAP12Q8IWW6 846 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 TDRD5Q8NAT2 981 aaKnown RBP15.2■□□□□ 0.02
NXF1-214ENST00000533048 HAUS1Q96CS2 278 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 LRRC3BQ96PB8 259 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 KRT12Q99456 494 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 BRD8Q9H0E9 1235 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 NOL6Q9H6R4 1146 aaKnown RBP15.2■□□□□ 0.02
NXF1-214ENST00000533048 EPS15L1Q9UBC2 864 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 DNPEPQ9ULA0 475 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 TBC1D30Q9Y2I9 924 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 HEY1Q9Y5J3 304 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 NUP205Q92621 2012 aa15.2■□□□□ 0.02
NXF1-214ENST00000533048 HACD1B0YJ81 288 aa15.19■□□□□ 0.02
NXF1-214ENST00000533048 LAMP2P13473 410 aa15.19■□□□□ 0.02
NXF1-214ENST00000533048 MX2P20592 715 aa15.19■□□□□ 0.02
NXF1-214ENST00000533048 EIF3EP60228 445 aaKnown RBP15.19■□□□□ 0.02
NXF1-214ENST00000533048 LMNB2Q03252 620 aa15.19■□□□□ 0.02
NXF1-214ENST00000533048 PDK1Q15118 436 aa15.19■□□□□ 0.02
NXF1-214ENST00000533048 PRKD1Q15139 912 aaPredicted RBP15.19■□□□□ 0.02
NXF1-214ENST00000533048 MPPE1Q53F39 396 aa15.19■□□□□ 0.02
NXF1-214ENST00000533048 GLE1Q53GS7 698 aaKnown RBP15.19■□□□□ 0.02
NXF1-214ENST00000533048 EP400NLQ6ZTU2 488 aa15.19■□□□□ 0.02
NXF1-214ENST00000533048 SETD3Q86TU7 594 aaPredicted RBP15.19■□□□□ 0.02
NXF1-214ENST00000533048 LRRC49Q8IUZ0 686 aa15.19■□□□□ 0.02
NXF1-214ENST00000533048 KLHL7Q8IXQ5 586 aa15.19■□□□□ 0.02
NXF1-214ENST00000533048 DEFB123Q8N688 67 aa15.19■□□□□ 0.02
NXF1-214ENST00000533048 BPIFB1Q8TDL5 484 aa15.19■□□□□ 0.02
NXF1-214ENST00000533048 HDAC11Q96DB2 347 aa15.19■□□□□ 0.02
NXF1-214ENST00000533048 P2RY11Q96G91 374 aa15.19■□□□□ 0.02
NXF1-214ENST00000533048 QKIQ96PU8 341 aaKnown RBP eCLIP15.19■□□□□ 0.02
NXF1-214ENST00000533048 NDFIP2Q9NV92 336 aa15.19■□□□□ 0.02
NXF1-214ENST00000533048 MARK1Q9P0L2 795 aa15.19■□□□□ 0.02
NXF1-214ENST00000533048 FEZ2Q9UHY8 353 aaPredicted RBP15.19■□□□□ 0.02
NXF1-214ENST00000533048 NYNRINQ9P2P1 1898 aaKnown RBP15.18■□□□□ 0.02
NXF1-214ENST00000533048 BCLAF3A2AJT9 711 aaKnown RBP15.18■□□□□ 0.02
NXF1-214ENST00000533048 TYW5A2RUC4 315 aaKnown RBP15.18■□□□□ 0.02
NXF1-214ENST00000533048 CFAP69A5D8W1 941 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 GRXCR2A6NFK2 248 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 SCAMP3O14828 347 aaKnown RBP15.18■□□□□ 0.02
NXF1-214ENST00000533048 PENKP01210 267 aaPredicted RBP15.18■□□□□ 0.02
NXF1-214ENST00000533048 RBP3P10745 1247 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 HOXD9P28356 352 aaPredicted RBP15.18■□□□□ 0.02
NXF1-214ENST00000533048 GARSP41250 739 aaKnown RBP15.18■□□□□ 0.02
NXF1-214ENST00000533048 VIPR2P41587 438 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 PTGIRP43119 386 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 YBEYP58557 167 aaPredicted RBP15.18■□□□□ 0.02
NXF1-214ENST00000533048 FCHO2Q0JRZ9 810 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 PARP15Q460N3 678 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 SLC45A4Q5BKX6 768 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 ZNF783Q6ZMS7 281 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 SYDE1Q6ZW31 735 aaPredicted RBP15.18■□□□□ 0.02
NXF1-214ENST00000533048 TFAP2DQ7Z6R9 452 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 CIR1Q86X95 450 aaPredicted RBP15.18■□□□□ 0.02
NXF1-214ENST00000533048 CDKL3Q8IVW4 592 aaPredicted RBP15.18■□□□□ 0.02
NXF1-214ENST00000533048 CFAP52Q8N1V2 620 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 ATL2Q8NHH9 583 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 GRK7Q8WTQ7 553 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 OSCP1Q8WVF1 389 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 FATE1Q969F0 183 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 ELSPBP1Q96BH3 223 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 RTP4Q96DX8 246 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 TMA16Q96EY4 203 aaKnown RBP15.18■□□□□ 0.02
NXF1-214ENST00000533048 TSGA13Q96PP4 275 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 FAM118BQ9BPY3 351 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 ZFP14Q9HCL3 533 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 AMACRQ9UHK6 382 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 NEU2Q9Y3R4 380 aa15.18■□□□□ 0.02
NXF1-214ENST00000533048 COL4A3Q01955 1670 aa15.17■□□□□ 0.02
NXF1-214ENST00000533048 FAM187AA6NFU0 413 aa15.17■□□□□ 0.02
NXF1-214ENST00000533048 HEPACAM2A8MVW5 462 aa15.17■□□□□ 0.02
NXF1-214ENST00000533048 BHMG1C9JSJ3 638 aaPredicted RBP15.17■□□□□ 0.02
NXF1-214ENST00000533048 H3BQ06 376 aaPredicted RBP15.17■□□□□ 0.02
NXF1-214ENST00000533048 TRDMT1O14717 391 aaKnown RBP15.17■□□□□ 0.02
NXF1-214ENST00000533048 PPP1R12AO14974 1030 aaPredicted RBP15.17■□□□□ 0.02
NXF1-214ENST00000533048 CTIFO43310 598 aaKnown RBP15.17■□□□□ 0.02
NXF1-214ENST00000533048 MBTPS2O43462 519 aa15.17■□□□□ 0.02
NXF1-214ENST00000533048 ECI2O75521 394 aa15.17■□□□□ 0.02
NXF1-214ENST00000533048 LUC7L3O95232 432 aaKnown RBP15.17■□□□□ 0.02
NXF1-214ENST00000533048 KCNA5P22460 613 aa15.17■□□□□ 0.02
NXF1-214ENST00000533048 OR1E1P30953 314 aa15.17■□□□□ 0.02
NXF1-214ENST00000533048 DR1Q01658 176 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms