RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 DMXL2Q8TDJ6 3036 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 BECN2A8MW95 431 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 TTC34A8MYJ7 566 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 KCNU1A8MYU2 1149 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 GRAP2O75791 330 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 RNASEH2AO75792 299 aaKnown RBP18.41■□□□□ 0.54
PCF11-206ENST00000533018 SRPRAP08240 638 aaKnown RBP18.41■□□□□ 0.54
PCF11-206ENST00000533018 CD27P26842 260 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 NNMTP40261 264 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 PITX1P78337 314 aaPredicted RBP18.41■□□□□ 0.54
PCF11-206ENST00000533018 SUZ12Q15022 739 aaKnown RBP18.41■□□□□ 0.54
PCF11-206ENST00000533018 CST6Q15828 149 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 KIF19Q2TAC6 998 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 LRSAM1Q6UWE0 723 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 USP30Q70CQ3 517 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 MMAAQ8IVH4 418 aaKnown RBP18.41■□□□□ 0.54
PCF11-206ENST00000533018 APCDD1Q8J025 514 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 DEFB106AQ8N104 65 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 RHBDD1Q8TEB9 315 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 ZCCHC14Q8WYQ9 949 aaKnown RBP18.41■□□□□ 0.54
PCF11-206ENST00000533018 PPP1R13BQ96KQ4 1090 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 MRGPRX3Q96LB0 322 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 SYNCQ9H7C4 482 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 TM9SF3Q9HD45 589 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 DDIT4Q9NX09 232 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 SLCO3A1Q9UIG8 710 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 PCOLCE2Q9UKZ9 415 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 APOBEC2Q9Y235 224 aaKnown RBP18.41■□□□□ 0.54
PCF11-206ENST00000533018 ANKRD6Q9Y2G4 727 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 SNX11Q9Y5W9 270 aa18.41■□□□□ 0.54
PCF11-206ENST00000533018 EDDM13A0A1B0GTR0 161 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 A0A1W2PP55 124 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 KCNK3O14649 394 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 MID1O15344 667 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 ZNF883P0CG24 379 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 SLC2A3P11169 496 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 PON1P27169 355 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 KRT9P35527 623 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 PTK2Q05397 1052 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 EFHC1Q5JVL4 640 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 RABGAP1LQ5R372 815 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 C9orf64Q5T6V5 341 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 OR6B2Q6IFH4 312 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 LAYNQ6UX15 382 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 RAB44Q7Z6P3 723 aaPredicted RBP18.4■□□□□ 0.54
PCF11-206ENST00000533018 CIR1Q86X95 450 aaPredicted RBP18.4■□□□□ 0.54
PCF11-206ENST00000533018 KDM1BQ8NB78 822 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 NOX5Q96PH1 765 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 CPXM1Q96SM3 734 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 NEUROG2Q9H2A3 272 aa18.4■□□□□ 0.54
PCF11-206ENST00000533018 TARSL2A2RTX5 802 aaKnown RBP18.39■□□□□ 0.53
PCF11-206ENST00000533018 GOLGA8CPA6NN73 597 aa18.39■□□□□ 0.53
PCF11-206ENST00000533018 IGLV3-25P01717 112 aa18.39■□□□□ 0.53
PCF11-206ENST00000533018 PDGFRAP16234 1089 aa18.39■□□□□ 0.53
PCF11-206ENST00000533018 CCR1P32246 355 aa18.39■□□□□ 0.53
PCF11-206ENST00000533018 GRIA4P48058 902 aa18.39■□□□□ 0.53
PCF11-206ENST00000533018 PSMD8P48556 350 aa18.39■□□□□ 0.53
PCF11-206ENST00000533018 SNX16P57768 344 aa18.39■□□□□ 0.53
PCF11-206ENST00000533018 NME3Q13232 169 aa18.39■□□□□ 0.53
PCF11-206ENST00000533018 KIAA0895LQ68EN5 471 aa18.39■□□□□ 0.53
PCF11-206ENST00000533018 NCEH1Q6PIU2 408 aa18.39■□□□□ 0.53
PCF11-206ENST00000533018 WDTC1Q8N5D0 677 aa18.39■□□□□ 0.53
PCF11-206ENST00000533018 C1orf131Q8NDD1 294 aaKnown RBP18.39■□□□□ 0.53
PCF11-206ENST00000533018 PDCL3Q9H2J4 239 aa18.39■□□□□ 0.53
PCF11-206ENST00000533018 SERGEFQ9UGK8 458 aa18.39■□□□□ 0.53
PCF11-206ENST00000533018 PLXNA2O75051 1894 aa18.39■□□□□ 0.53
PCF11-206ENST00000533018 FREM2Q5SZK8 3169 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 NYNRINQ9P2P1 1898 aaKnown RBP18.38■□□□□ 0.53
PCF11-206ENST00000533018 LRRC72A6NJI9 287 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 FLRT2O43155 660 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 HSF2BPO75031 334 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 CBFA2T3O75081 653 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 GLI1P08151 1106 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 C7P10643 843 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 SLC8A1P32418 973 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 STK19P49842 368 aaPredicted RBP18.38■□□□□ 0.53
PCF11-206ENST00000533018 GALCP54803 685 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 C21orf59P57076 290 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 SLC12A1Q13621 1099 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 C11orf57Q6ZUT1 292 aaPredicted RBP18.38■□□□□ 0.53
PCF11-206ENST00000533018 FAM183BPQ6ZVS7 135 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 CCAR2Q8N163 923 aaKnown RBP18.38■□□□□ 0.53
PCF11-206ENST00000533018 STK40Q8N2I9 435 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 MLKLQ8NB16 471 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 ADAMTS14Q8WXS8 1223 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 SHC3Q92529 594 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 RPRD1AQ96P16 312 aaPredicted RBP18.38■□□□□ 0.53
PCF11-206ENST00000533018 OSGEPQ9NPF4 335 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 DNAJC12Q9UKB3 198 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 RALYQ9UKM9 306 aaKnown RBP18.38■□□□□ 0.53
PCF11-206ENST00000533018 PCDHGC3Q9UN70 934 aa18.38■□□□□ 0.53
PCF11-206ENST00000533018 TP53BP1Q12888 1972 aaPredicted RBP18.38■□□□□ 0.53
PCF11-206ENST00000533018 DSPP15924 2871 aaKnown RBP18.38■□□□□ 0.53
PCF11-206ENST00000533018 FAM208BQ5VWN6 2430 aa18.37■□□□□ 0.53
PCF11-206ENST00000533018 GTPBP10A4D1E9 387 aaKnown RBP18.37■□□□□ 0.53
PCF11-206ENST00000533018 PES1O00541 588 aaKnown RBP18.37■□□□□ 0.53
PCF11-206ENST00000533018 IL1BP01584 269 aa18.37■□□□□ 0.53
PCF11-206ENST00000533018 IGHV4-34P06331 123 aa18.37■□□□□ 0.53
PCF11-206ENST00000533018 SULT2A1Q06520 285 aa18.37■□□□□ 0.53
PCF11-206ENST00000533018 ARID5BQ14865 1188 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms