RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 MMAAQ8IVH4 418 aaKnown RBP17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 APCDD1Q8J025 514 aa17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 IGSF8Q969P0 613 aa17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 SLC6A18Q96N87 628 aa17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 SLC4A5Q9BY07 1137 aa17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 UBE2TQ9NPD8 197 aaPredicted RBP17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 LHX6Q9UPM6 363 aa17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 NCKAP1Q9Y2A7 1128 aa17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.68■□□□□ 0.42
RPUSD4-207ENST00000532800 CELSR3Q9NYQ7 3312 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 CAPN9O14815 690 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 THAP12O43422 761 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 IGLV3-25P01717 112 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 APOEP02649 317 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 TACR2P21452 398 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 CTSKP43235 329 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 ACADSBP45954 432 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 CCT8P50990 548 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 GALCP54803 685 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 GJB7Q6PEY0 223 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 ADAT2Q7Z6V5 191 aaKnown RBP17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 CIR1Q86X95 450 aaPredicted RBP17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 MDM1Q8TC05 714 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 RPL10LQ96L21 214 aaKnown RBP17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 CDC6Q99741 560 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 SRRTQ9BXP5 876 aaKnown RBP17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 NEUROG2Q9H2A3 272 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 EBF2Q9HAK2 575 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 KIAA1522Q9P206 1035 aaPredicted RBP17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 SLCO3A1Q9UIG8 710 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 SCML1Q9UN30 329 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 ITIH6Q6UXX5 1313 aa17.67■□□□□ 0.42
RPUSD4-207ENST00000532800 A0A1W2PPC4 97 aa17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 RNASEH1O60930 286 aaKnown RBP17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 GADD45BO75293 160 aaPredicted RBP17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 RNASEH2AO75792 299 aaKnown RBP17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 DKK1O94907 266 aa17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 GNA14O95837 355 aa17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 TRUB2O95900 331 aaKnown RBP17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 SRPRAP08240 638 aaKnown RBP17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 GNA15P30679 374 aa17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 PSMD8P48556 350 aa17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 STK19P49842 368 aaPredicted RBP17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 APBA1Q02410 837 aa17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 BECN1Q14457 450 aa17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 ARID5BQ14865 1188 aa17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 SUZ12Q15022 739 aaKnown RBP17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 TAF5Q15542 800 aa17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 BEND5Q7L4P6 421 aa17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 CCDC117Q8IWD4 279 aaPredicted RBP17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 KDM1BQ8NB78 822 aa17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 STK32AQ8WU08 396 aa17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 ZNF606Q8WXB4 792 aa17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 CRACR2AQ9BSW2 395 aa17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 POPDC2Q9HBU9 364 aa17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 CEP83Q9Y592 693 aa17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 ADAMTS20P59510 1910 aa17.66■□□□□ 0.42
RPUSD4-207ENST00000532800 BECN2A8MW95 431 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 MED7O43513 233 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 MOCS3O95396 460 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 WNT1P04628 370 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 VAV1P15498 845 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 SLC8A1P32418 973 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 GRK6P43250 576 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 RACK1P63244 317 aaKnown RBP17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 ECT2LQ008S8 904 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 PDCLQ13371 301 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 EIF4EBP2Q13542 120 aaPredicted RBP17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 KCNJ12Q14500 433 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 MEA1Q16626 185 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 PRAMEF14Q5SWL7 426 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 LRSAM1Q6UWE0 723 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 TMPRSS7Q7RTY8 843 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 TMEM110Q86TL2 294 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 STK40Q8N2I9 435 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 AADATQ8N5Z0 425 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 PTPRN2Q92932 1015 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 BTN2A3PQ96KV6 586 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 FAM129BQ96TA1 746 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 OMDQ99983 421 aa17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 CCDC86Q9H6F5 360 aaKnown RBP17.65■□□□□ 0.42
RPUSD4-207ENST00000532800 APC2O95996 2303 aa17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 SYNJ2BP-COX16A0A087WUM0 186 aa17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 EDDM13A0A1B0GTR0 161 aa17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 TARSL2A2RTX5 802 aaKnown RBP17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 C10orf142B7Z368 130 aa17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 WNT9AO14904 365 aa17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 VILLO15195 856 aa17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 PCDHGA12O60330 932 aa17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 PDGFRAP16234 1089 aa17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 MZF1P28698 734 aaPredicted RBP17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 METAP1P53582 386 aa17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 C21orf59P57076 290 aa17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 YWHAZP63104 245 aaKnown RBP17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 CCDC157Q569K6 752 aa17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 RNF219Q5W0B1 726 aaPredicted RBP17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 TRIM65Q6PJ69 517 aa17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 C19orf48Q6RUI8 117 aa17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 CCAR2Q8N163 923 aaKnown RBP17.64■□□□□ 0.41
RPUSD4-207ENST00000532800 OR2T34Q8NGX1 318 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms