RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 S1PR5Q9H228 398 aa22.6■■□□□ 1.21
PACSIN3-209ENST00000532457 H3BQ06 376 aaPredicted RBP22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 SGK1O00141 431 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 ACSL4O60488 711 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 TNFRSF8P28908 595 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 CDC25CP30307 473 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 VPS41P49754 854 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 DRG2P55039 364 aaKnown RBP22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 BRD3Q15059 726 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 ALFQ53S48 1182 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 RFWD3Q6PCD5 774 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 GRASPQ7Z6J2 395 aaPredicted RBP22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 RUBCNQ92622 972 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 PLD4Q96BZ4 506 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 RAB17Q9H0T7 212 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 AGO1Q9UL18 857 aaKnown RBP22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 CPQQ9Y646 472 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 BRWD1Q9NSI6 2320 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 IGLV3-10A0A075B6K4 115 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 DRGXA6NNA5 263 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 SCAMP3O14828 347 aaKnown RBP22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 FGF19O95750 216 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 TUBBP07437 444 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 FAM153BP0C7A2 387 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 CORO1AP31146 461 aaKnown RBP22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 LMNB2Q03252 620 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 FAM153CQ494X1 144 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 SYDE1Q6ZW31 735 aaPredicted RBP22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 NLRP14Q86W24 1093 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 CELF6Q96J87 481 aaKnown RBP22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 SMG9Q9H0W8 520 aaKnown RBP22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 FAM153AQ9UHL3 310 aa22.59■■□□□ 1.21
PACSIN3-209ENST00000532457 C5orf42Q9H799 3197 aa22.58■■□□□ 1.21
PACSIN3-209ENST00000532457 BCLAF3A2AJT9 711 aaKnown RBP22.58■■□□□ 1.21
PACSIN3-209ENST00000532457 CCDC151A5D8V7 595 aa22.58■■□□□ 1.21
PACSIN3-209ENST00000532457 TRDMT1O14717 391 aaKnown RBP22.58■■□□□ 1.21
PACSIN3-209ENST00000532457 SEC31AO94979 1220 aaKnown RBP22.58■■□□□ 1.21
PACSIN3-209ENST00000532457 GAS8O95995 478 aa22.58■■□□□ 1.21
PACSIN3-209ENST00000532457 IFNB1P01574 187 aa22.58■■□□□ 1.21
PACSIN3-209ENST00000532457 TACR2P21452 398 aa22.58■■□□□ 1.21
PACSIN3-209ENST00000532457 MTHFRP42898 656 aa22.58■■□□□ 1.21
PACSIN3-209ENST00000532457 HARS2P49590 506 aaKnown RBP22.58■■□□□ 1.21
PACSIN3-209ENST00000532457 XRCC4Q13426 336 aa22.58■■□□□ 1.21
PACSIN3-209ENST00000532457 TEAD2Q15562 447 aa22.58■■□□□ 1.21
PACSIN3-209ENST00000532457 PRSS36Q5K4E3 855 aa22.58■■□□□ 1.21
PACSIN3-209ENST00000532457 ZDHHC24Q6UX98 284 aa22.58■■□□□ 1.21
PACSIN3-209ENST00000532457 PDZD4Q76G19 769 aaPredicted RBP22.58■■□□□ 1.21
PACSIN3-209ENST00000532457 NECTIN4Q96NY8 510 aa22.58■■□□□ 1.21
PACSIN3-209ENST00000532457 VAV1P15498 845 aa22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 HTR7P34969 479 aa22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 RPL22P35268 128 aaKnown RBP22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 SLC45A4Q5BKX6 768 aa22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 CIR1Q86X95 450 aaPredicted RBP22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 ARHGAP12Q8IWW6 846 aa22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 RSAD2Q8WXG1 361 aa22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 ZDHHC18Q9NUE0 388 aa22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 PPARGC1AQ9UBK2 798 aaKnown RBP22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 ZNF212Q9UDV6 495 aa22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 ASIC3Q9UHC3 531 aa22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 ZNF197O14709 1029 aa22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 SLC7A9P82251 487 aa22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 BEND6Q5SZJ8 279 aaPredicted RBP22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 CHSY1Q86X52 802 aa22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 CFAP52Q8N1V2 620 aa22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 AZIN2Q96A70 460 aa22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 QKIQ96PU8 341 aaKnown RBP eCLIP22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 NOL6Q9H6R4 1146 aaKnown RBP22.57■■□□□ 1.2
PACSIN3-209ENST00000532457 DOCK4Q8N1I0 1966 aa22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 WASH4PA8MWX3 477 aa22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 KCNN4O15554 427 aa22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 STIP1P31948 543 aaKnown RBP22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 ADCY8P40145 1251 aa22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 SMAD4Q13485 552 aaKnown RBP22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 PUS10Q3MIT2 529 aaKnown RBP22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 GPR158Q5T848 1215 aa22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 LGI2Q8N0V4 545 aa22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 RTL3Q8N8U3 475 aaKnown RBP22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 AENQ8WTP8 325 aaKnown RBP22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 HNRNPLLQ8WVV9 542 aaKnown RBP22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 ZSWIM3Q96MP5 696 aa22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 GDAP1L1Q96MZ0 367 aa22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 GCNAQ96QF7 691 aa22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 CATSPERBQ9H7T0 1116 aa22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 FAM114A2Q9NRY5 505 aa22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 ZNF446Q9NWS9 450 aa22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 FAM50BQ9Y247 325 aa22.56■■□□□ 1.2
PACSIN3-209ENST00000532457 FGF10O15520 208 aaPredicted RBP22.55■■□□□ 1.2
PACSIN3-209ENST00000532457 MCM3P25205 808 aa22.55■■□□□ 1.2
PACSIN3-209ENST00000532457 SLC11A2P49281 568 aa22.55■■□□□ 1.2
PACSIN3-209ENST00000532457 SGSHP51688 502 aa22.55■■□□□ 1.2
PACSIN3-209ENST00000532457 CUL1Q13616 776 aa22.55■■□□□ 1.2
PACSIN3-209ENST00000532457 PRKD1Q15139 912 aaPredicted RBP22.55■■□□□ 1.2
PACSIN3-209ENST00000532457 LEXMQ3ZCV2 418 aa22.55■■□□□ 1.2
PACSIN3-209ENST00000532457 C5orf22Q49AR2 442 aa22.55■■□□□ 1.2
PACSIN3-209ENST00000532457 AFMIDQ63HM1 303 aa22.55■■□□□ 1.2
PACSIN3-209ENST00000532457 LRRC31Q6UY01 552 aa22.55■■□□□ 1.2
PACSIN3-209ENST00000532457 TFAP2DQ7Z6R9 452 aa22.55■■□□□ 1.2
PACSIN3-209ENST00000532457 DEPDC1BQ8WUY9 529 aa22.55■■□□□ 1.2
PACSIN3-209ENST00000532457 TFB1MQ8WVM0 346 aaKnown RBP22.55■■□□□ 1.2
PACSIN3-209ENST00000532457 RTP4Q96DX8 246 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms