RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 DTX3LQ8TDB6 740 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 TMEM121Q9BTD3 319 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 FAM153AQ9UHL3 310 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 VPS51Q9UID3 782 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 KCPQ6ZWJ8 1503 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 A0A1W2PQ45 241 aaPredicted RBP11.54□□□□□ -0.56
PTPRK-221ENST00000532331 A0A1W2PQY0 241 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 CLDN5O00501 218 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 SEC24DO94855 1032 aaPredicted RBP11.54□□□□□ -0.56
PTPRK-221ENST00000532331 CYP2A7P20853 494 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 CNTFP26441 200 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 KBTBD12Q3ZCT8 623 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 TTC7BQ86TV6 843 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 ARID3BQ8IVW6 561 aaPredicted RBP11.54□□□□□ -0.56
PTPRK-221ENST00000532331 EME1Q96AY2 570 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 NSL1Q96IY1 281 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 ATP13A3Q9H7F0 1226 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 SFMBT1Q9UHJ3 866 aa11.54□□□□□ -0.56
PTPRK-221ENST00000532331 RGPD8O14715 1765 aaPredicted RBP11.54□□□□□ -0.56
PTPRK-221ENST00000532331 PLIN4Q96Q06 1357 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 NCF1BA6NI72 391 aaPredicted RBP11.53□□□□□ -0.56
PTPRK-221ENST00000532331 C16orf96A6NNT2 1141 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 NCF1CA8MVU1 366 aaPredicted RBP11.53□□□□□ -0.56
PTPRK-221ENST00000532331 O00370 1275 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 NCF1P14598 390 aaPredicted RBP11.53□□□□□ -0.56
PTPRK-221ENST00000532331 SULT2A1Q06520 285 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 CDH17Q12864 832 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 PEX6Q13608 980 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 FAM136AQ96C01 138 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 IGKV6D-41A0A0C4DH26 115 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 DNM1LO00429 736 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 BOP1Q14137 746 aaKnown RBP11.53□□□□□ -0.56
PTPRK-221ENST00000532331 CACHD1Q5VU97 1274 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 TRAPPC5Q8IUR0 188 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 ATAD1Q8NBU5 361 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 KREMEN2Q8NCW0 462 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 ING5Q8WYH8 240 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 PDZD7Q9H5P4 517 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 GOLGA8TH3BQL2 631 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 OR4Q2P0C623 313 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 CYP3A5P20815 502 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 SARSP49591 514 aaKnown RBP11.53□□□□□ -0.56
PTPRK-221ENST00000532331 ERFP50548 548 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.53□□□□□ -0.56
PTPRK-221ENST00000532331 OR5B17Q8NGF7 314 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 HTR3CQ8WXA8 447 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 DUSP16Q9BY84 665 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 ABCG4Q9H172 646 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 KIAA1522Q9P206 1035 aaPredicted RBP11.53□□□□□ -0.56
PTPRK-221ENST00000532331 A0A087X0B3 334 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 ZNF839A8K0R7 811 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 FAM47E-STBD1D6RA91 191 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 STX5Q13190 355 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 POU6F1Q14863 301 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 CYTH1Q15438 398 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 OTOAQ7RTW8 1153 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 ANKRD7Q92527 254 aa11.53□□□□□ -0.56
PTPRK-221ENST00000532331 MAGEB16A2A368 324 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 ZSCAN5CA6NGD5 496 aaPredicted RBP11.52□□□□□ -0.56
PTPRK-221ENST00000532331 DGKIO75912 1065 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 TAF10Q12962 218 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 DNAJC3Q13217 504 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 UBXN2BQ14CS0 331 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 FAM183BPQ6ZVS7 135 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 CEP41Q9BYV8 373 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 PRDM16Q9HAZ2 1276 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 IL1RL2Q9HB29 575 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 RGS18Q9NS28 235 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 APPL1Q9UKG1 709 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 GABRQQ9UN88 632 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 ZNF536O15090 1300 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 IRS2Q9Y4H2 1338 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 LOC100653049A0A140TA62 436 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 HACD1B0YJ81 288 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 XPO1O14980 1071 aaKnown RBP11.52□□□□□ -0.56
PTPRK-221ENST00000532331 KRT34O76011 436 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 WDR93Q6P2C0 686 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 LRRC8BQ6P9F7 803 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 HORMAD1Q86X24 394 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 HOMEZQ8IX15 550 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 SYTL1Q8IYJ3 562 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 FLCNQ8NFG4 579 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 EPS8L3Q8TE67 593 aaKnown RBP11.52□□□□□ -0.56
PTPRK-221ENST00000532331 PLEKHA8Q96JA3 519 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 VAT1Q99536 393 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 MRPL45Q9BRJ2 306 aaKnown RBP11.52□□□□□ -0.56
PTPRK-221ENST00000532331 LACRTQ9GZZ8 138 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 ZFP14Q9HCL3 533 aa11.52□□□□□ -0.56
PTPRK-221ENST00000532331 KANSL1LA0AUZ9 987 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 ITGB6P18564 788 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 TNNI3P19429 210 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 TCN1P20061 433 aaPredicted RBP11.52□□□□□ -0.57
PTPRK-221ENST00000532331 MIPP30301 263 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 GPR1P46091 355 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 CLCNKBP51801 687 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 DAB2P98082 770 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 MPPE1Q53F39 396 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 RAET1GQ6H3X3 334 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 WDR59Q6PJI9 974 aa11.52□□□□□ -0.57
PTPRK-221ENST00000532331 PRKD2Q9BZL6 878 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms