RNA–Protein interactions for RNA: ENST00000532330.5

BRPF3-209, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-209ENST00000532330 LHX8Q68G74 356 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 RTL3Q8N8U3 475 aaKnown RBP11.29□□□□□ -0.6
BRPF3-209ENST00000532330 TTPALQ9BTX7 342 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 KLF11O14901 512 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 TGDSO95455 350 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 MRPL58Q14197 206 aaKnown RBP11.29□□□□□ -0.6
BRPF3-209ENST00000532330 TAF12Q16514 161 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 KIAA0319Q5VV43 1072 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 POTEHQ6S545 545 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 C3orf58Q8NDZ4 430 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 FCRL5Q96RD9 977 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 ANKRD6Q9Y2G4 727 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 MATN3O15232 486 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 SNX3O60493 162 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 BEST1O76090 585 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 USP1O94782 785 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 ASMTLO95671 621 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 IBSPP21815 317 aaPredicted RBP11.29□□□□□ -0.6
BRPF3-209ENST00000532330 GP5P40197 560 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 SKIV2L2P42285 1042 aaKnown RBP11.29□□□□□ -0.6
BRPF3-209ENST00000532330 PARP15Q460N3 678 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 PDPK2PQ6A1A2 396 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.29□□□□□ -0.6
BRPF3-209ENST00000532330 PPP1R13LQ8WUF5 828 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 AZIN2Q96A70 460 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 TEKT5Q96M29 485 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 ZNF599Q96NL3 588 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 KCNK16Q96T55 309 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 LPIN3Q9BQK8 851 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 TRIM55Q9BYV6 548 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 ZYG11BQ9C0D3 744 aa11.29□□□□□ -0.6
BRPF3-209ENST00000532330 MYO1CO00159 1063 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 PTPN3P26045 913 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 CLLU1OSQ5K130 101 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 RABGAP1LQ5R372 815 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 C1orf53Q5VUE5 145 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 KIAA1841Q6NSI8 718 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 FUT10Q6P4F1 479 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 CNKSR3Q6P9H4 555 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 HOMEZQ8IX15 550 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 FAM126BQ8IXS8 530 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 BANPQ8N9N5 519 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 ANKLE1Q8NAG6 615 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 SIGLEC10Q96LC7 697 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 RAB3IPQ96QF0 476 aaPredicted RBP11.28□□□□□ -0.6
BRPF3-209ENST00000532330 ELAC2Q9BQ52 826 aaKnown RBP11.28□□□□□ -0.6
BRPF3-209ENST00000532330 TRPC7Q9HCX4 862 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 MRGBPQ9NV56 204 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 ZFATQ9P243 1243 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 PRDM4Q9UKN5 801 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 VANGL2Q9ULK5 521 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 AMHP03971 560 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 CCNFP41002 786 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 SLC11A2P49281 568 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 OTUD1Q5VV17 481 aaPredicted RBP11.28□□□□□ -0.6
BRPF3-209ENST00000532330 UNC5AQ6ZN44 842 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 OR10T2Q8NGX3 314 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 PPP1R14CQ8TAE6 165 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 FAM167BQ9BTA0 163 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 CASS4Q9NQ75 786 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.28□□□□□ -0.6
BRPF3-209ENST00000532330 MTO1Q9Y2Z2 717 aaKnown RBP11.28□□□□□ -0.6
BRPF3-209ENST00000532330 TTLL3Q9Y4R7 772 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 DOCK3Q8IZD9 2030 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 HCRTO43612 131 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 LRIG2O94898 1065 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 CXCL10P02778 98 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 CSH1P0DML2 217 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 CSH2P0DML3 217 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 HAPLN1P10915 354 aaPredicted RBP11.28□□□□□ -0.6
BRPF3-209ENST00000532330 SERPINB8P50452 374 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 HK2P52789 917 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 KBTBD12Q3ZCT8 623 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 C6orf89Q6UWU4 347 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 CAPN12Q6ZSI9 719 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 TRPM8Q7Z2W7 1104 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 CAND1Q86VP6 1230 aaKnown RBP11.28□□□□□ -0.6
BRPF3-209ENST00000532330 RASSF3Q86WH2 238 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 ZNF567Q8N184 647 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 DENND1AQ8TEH3 1009 aa11.28□□□□□ -0.6
BRPF3-209ENST00000532330 SCG3Q8WXD2 468 aaKnown RBP11.28□□□□□ -0.6
BRPF3-209ENST00000532330 UBE2OQ9C0C9 1292 aaKnown RBP11.28□□□□□ -0.6
BRPF3-209ENST00000532330 PRG3Q9Y2Y8 225 aaPredicted RBP11.28□□□□□ -0.6
BRPF3-209ENST00000532330 FAM92AA1XBS5 289 aa11.27□□□□□ -0.6
BRPF3-209ENST00000532330 TRIM49D1C9J1S8 452 aa11.27□□□□□ -0.6
BRPF3-209ENST00000532330 PFDN6O15212 129 aa11.27□□□□□ -0.6
BRPF3-209ENST00000532330 PAGE1O75459 146 aa11.27□□□□□ -0.6
BRPF3-209ENST00000532330 LATS1O95835 1130 aa11.27□□□□□ -0.6
BRPF3-209ENST00000532330 CRHR1P34998 444 aa11.27□□□□□ -0.6
BRPF3-209ENST00000532330 PDE1BQ01064 536 aa11.27□□□□□ -0.6
BRPF3-209ENST00000532330 ZRSR2Q15696 482 aaKnown RBP11.27□□□□□ -0.6
BRPF3-209ENST00000532330 TBCCQ15814 346 aa11.27□□□□□ -0.6
BRPF3-209ENST00000532330 PCID2Q5JVF3 399 aa11.27□□□□□ -0.6
BRPF3-209ENST00000532330 KLHDC10Q6PID8 442 aa11.27□□□□□ -0.6
BRPF3-209ENST00000532330 LVRNQ6Q4G3 990 aa11.27□□□□□ -0.6
BRPF3-209ENST00000532330 PRUNE1Q86TP1 453 aa11.27□□□□□ -0.6
BRPF3-209ENST00000532330 EDEM1Q92611 657 aa11.27□□□□□ -0.6
BRPF3-209ENST00000532330 TRIM17Q9Y577 477 aa11.27□□□□□ -0.6
BRPF3-209ENST00000532330 TRIP12Q14669 1992 aaPredicted RBP11.27□□□□□ -0.6
BRPF3-209ENST00000532330 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms