RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 NLRP14Q86W24 1093 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 MFN1Q8IWA4 741 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 WFIKKN2Q8TEU8 576 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 SNRNP25Q9BV90 132 aaKnown RBP14.91□□□□□ -0.02
CPSF1-206ENST00000531480 LACRTQ9GZZ8 138 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 RBM12Q9NTZ6 932 aaKnown RBP14.91□□□□□ -0.02
CPSF1-206ENST00000531480 SALL4Q9UJQ4 1053 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 AP4E1Q9UPM8 1137 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 ARIH1Q9Y4X5 557 aaPredicted RBP14.91□□□□□ -0.02
CPSF1-206ENST00000531480 ADGRG1Q9Y653 693 aa14.91□□□□□ -0.02
CPSF1-206ENST00000531480 WASH4PA8MWX3 477 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 TIMM44O43615 452 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 CNTN5O94779 1100 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 PAPSS2O95340 614 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-206ENST00000531480 DCNP07585 359 aaKnown RBP14.9□□□□□ -0.02
CPSF1-206ENST00000531480 HNRNPLP14866 589 aaKnown RBP eCLIP14.9□□□□□ -0.02
CPSF1-206ENST00000531480 HOXD11P31277 338 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-206ENST00000531480 HCAR3P49019 387 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 MRPS21P82921 87 aaKnown RBP14.9□□□□□ -0.02
CPSF1-206ENST00000531480 LMAN2Q12907 356 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 ENPP2Q13822 863 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 GEN1Q17RS7 908 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 HSF5Q4G112 596 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-206ENST00000531480 TXNRD3NBQ6F5E7 133 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 NUDT18Q6ZVK8 323 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 POLNQ7Z5Q5 900 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 SETD3Q86TU7 594 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-206ENST00000531480 ADIPOR2Q86V24 386 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 ALYREFQ86V81 257 aaKnown RBP14.9□□□□□ -0.02
CPSF1-206ENST00000531480 PYROXD2Q8N2H3 581 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 PRSS33Q8NF86 280 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 USP33Q8TEY7 942 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 TTC17Q96AE7 1141 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 ALG14Q96F25 216 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 ZYG11BQ9C0D3 744 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 PCSK1NQ9UHG2 260 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 GGA2Q9UJY4 613 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 INTS6Q9UL03 887 aaKnown RBP14.9□□□□□ -0.02
CPSF1-206ENST00000531480 TFR2Q9UP52 801 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 OR51B4Q9Y5P0 310 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 CACNA1IQ9P0X4 2223 aa14.9□□□□□ -0.02
CPSF1-206ENST00000531480 CKAP5Q14008 2032 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 TBC1D3BA6NDS4 549 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 STK25O00506 426 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 RNF40O75150 1001 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 RARAP10276 462 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 PABPC1P11940 636 aaKnown RBP14.89□□□□□ -0.03
CPSF1-206ENST00000531480 RHOQP17081 205 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 MSNP26038 577 aaKnown RBP14.89□□□□□ -0.03
CPSF1-206ENST00000531480 CD70P32970 193 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 SLC1A1P43005 524 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 ARSEP51690 589 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 OXCT1P55809 520 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 NHLH1Q02575 133 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 CDH18Q13634 790 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 DMC1Q14565 340 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 CA9Q16790 459 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 C11orf63Q6NUN7 778 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 ZNF783Q6ZMS7 281 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 ZNF662Q6ZS27 426 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 Q6ZS52 159 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 CIR1Q86X95 450 aaPredicted RBP14.89□□□□□ -0.03
CPSF1-206ENST00000531480 CPNE8Q86YQ8 564 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 AHI1Q8N157 1196 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 TXLNBQ8N3L3 684 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 SPEM1Q8N4L4 309 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 OR52K2Q8NGK3 314 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 TBC1D31Q96DN5 1066 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 ABCB8Q9NUT2 735 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 TMEM248Q9NWD8 314 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 MPP6Q9NZW5 540 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 KIAA1522Q9P206 1035 aaPredicted RBP14.89□□□□□ -0.03
CPSF1-206ENST00000531480 STIM2Q9P246 746 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 DUSP10Q9Y6W6 482 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 WDFY4Q6ZS81 3184 aa14.89□□□□□ -0.03
CPSF1-206ENST00000531480 ANTXRLA6NF34 631 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 H0Y626 953 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 NPC1O15118 1278 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 BUB1BO60566 1050 aaPredicted RBP14.88□□□□□ -0.03
CPSF1-206ENST00000531480 SRGAP2O75044 1071 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 MAPKAPK2P49137 400 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 VASPP50552 380 aaPredicted RBP14.88□□□□□ -0.03
CPSF1-206ENST00000531480 TAS2R40P59535 323 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 MESDQ14696 234 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 PLEKHG6Q3KR16 790 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 FUT11Q495W5 492 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 LRRC38Q5VT99 294 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 PKN3Q6P5Z2 889 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 CARNMT1Q8N4J0 409 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 IL17RCQ8NAC3 791 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 TPCN2Q8NHX9 752 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 TSC1Q92574 1164 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 KCTD15Q96SI1 283 aaPredicted RBP14.88□□□□□ -0.03
CPSF1-206ENST00000531480 EPAS1Q99814 870 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 DESI2Q9BSY9 194 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 GPATCH2LQ9NWQ4 482 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 ELOVL2Q9NXB9 296 aa14.88□□□□□ -0.03
CPSF1-206ENST00000531480 THAP10Q9P2Z0 257 aaPredicted RBP14.88□□□□□ -0.03
CPSF1-206ENST00000531480 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.87□□□□□ -0.03
CPSF1-206ENST00000531480 CXorf51AA0A1B0GTR3 108 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms