RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 TTC39BQ5VTQ0 682 aaPredicted RBP11.36□□□□□ -0.59
CAPN1-221ENST00000531068 SND1Q7KZF4 910 aaKnown RBP eCLIP11.36□□□□□ -0.59
CAPN1-221ENST00000531068 RABEPKQ7Z6M1 372 aa11.36□□□□□ -0.59
CAPN1-221ENST00000531068 CHSY1Q86X52 802 aa11.36□□□□□ -0.59
CAPN1-221ENST00000531068 LGI2Q8N0V4 545 aa11.36□□□□□ -0.59
CAPN1-221ENST00000531068 CARNMT1Q8N4J0 409 aa11.36□□□□□ -0.59
CAPN1-221ENST00000531068 FRMD1Q8N878 549 aa11.36□□□□□ -0.59
CAPN1-221ENST00000531068 KDM1BQ8NB78 822 aa11.36□□□□□ -0.59
CAPN1-221ENST00000531068 SORCS1Q8WY21 1168 aa11.36□□□□□ -0.59
CAPN1-221ENST00000531068 TTC17Q96AE7 1141 aa11.36□□□□□ -0.59
CAPN1-221ENST00000531068 NUSAP1Q9BXS6 441 aaKnown RBP11.36□□□□□ -0.59
CAPN1-221ENST00000531068 NUCKS1Q9H1E3 243 aaKnown RBP11.36□□□□□ -0.59
CAPN1-221ENST00000531068 TMEM245Q9H330 911 aa11.36□□□□□ -0.59
CAPN1-221ENST00000531068 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.36□□□□□ -0.59
CAPN1-221ENST00000531068 KIAA1522Q9P206 1035 aaPredicted RBP11.36□□□□□ -0.59
CAPN1-221ENST00000531068 ARHGAP20Q9P2F6 1191 aa11.36□□□□□ -0.59
CAPN1-221ENST00000531068 EVLQ9UI08 416 aaPredicted RBP11.36□□□□□ -0.59
CAPN1-221ENST00000531068 STAP1Q9ULZ2 295 aa11.36□□□□□ -0.59
CAPN1-221ENST00000531068 NENFQ9UMX5 172 aa11.36□□□□□ -0.59
CAPN1-221ENST00000531068 CYP8B1Q9UNU6 501 aa11.36□□□□□ -0.59
CAPN1-221ENST00000531068 SYNJ2BP-COX16A0A087WUM0 186 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 DCDC2BA2VCK2 349 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 LRRC53A6NM62 1247 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 DAB1O75553 588 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 GRAP2O75791 330 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 CD70P32970 193 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 SOX5P35711 763 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 PTGER3P43115 390 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 SGSHP51688 502 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 RNASE9P60153 205 aaKnown RBP11.35□□□□□ -0.59
CAPN1-221ENST00000531068 ZBTB16Q05516 673 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 ZNF33AQ06730 810 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 LMAN2Q12907 356 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 NME3Q13232 169 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 MAPK8IP2Q13387 824 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-221ENST00000531068 CAMK2GQ13555 558 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-221ENST00000531068 STPG1Q5TH74 334 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 TAF3Q5VWG9 929 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 RAP1GAP2Q684P5 730 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 NOP9Q86U38 636 aaKnown RBP11.35□□□□□ -0.59
CAPN1-221ENST00000531068 TMTC1Q8IUR5 882 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 CFAP52Q8N1V2 620 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 OR2T3Q8NH03 318 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 CYB5D2Q8WUJ1 264 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 ERLEC1Q96DZ1 483 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 ZNF419Q96HQ0 510 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-221ENST00000531068 LMLNQ96KR4 655 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 PRICKLE1Q96MT3 831 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-221ENST00000531068 MKRN2Q9H000 416 aaKnown RBP11.35□□□□□ -0.59
CAPN1-221ENST00000531068 SMOC1Q9H4F8 434 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 WDCPQ9H6R7 721 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 NLRC4Q9NPP4 1024 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 COX16Q9P0S2 106 aa11.35□□□□□ -0.59
CAPN1-221ENST00000531068 REXO2Q9Y3B8 237 aaKnown RBP11.35□□□□□ -0.59
CAPN1-221ENST00000531068 ZNF638Q14966 1978 aaKnown RBP11.34□□□□□ -0.59
CAPN1-221ENST00000531068 ZNF292O60281 2723 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 SOWAHDA6NJG2 315 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 M0QYT0 321 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 RIOK3O14730 519 aaKnown RBP11.34□□□□□ -0.59
CAPN1-221ENST00000531068 RNASEH1O60930 286 aaKnown RBP11.34□□□□□ -0.59
CAPN1-221ENST00000531068 GFPT2O94808 682 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 LUC7L3O95232 432 aaKnown RBP11.34□□□□□ -0.59
CAPN1-221ENST00000531068 LCA5LO95447 670 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 SRPRAP08240 638 aaKnown RBP11.34□□□□□ -0.59
CAPN1-221ENST00000531068 MMEP08473 750 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 CCDC172P0C7W6 258 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 PRKCHP24723 683 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 NNMTP40261 264 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 ETF1P62495 437 aaKnown RBP11.34□□□□□ -0.59
CAPN1-221ENST00000531068 PITX1P78337 314 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-221ENST00000531068 CDR2Q01850 454 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 SULT2A1Q06520 285 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 SFSWAPQ12872 951 aaKnown RBP11.34□□□□□ -0.59
CAPN1-221ENST00000531068 PTPRNQ16849 979 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 DUOXA1Q1HG43 343 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 SLC25A52Q3SY17 297 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 TRIM61Q5EBN2 209 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 WDR45BQ5MNZ6 344 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 BRMS1LQ5PSV4 323 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 FAM102AQ5T9C2 384 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-221ENST00000531068 DAB2IPQ5VWQ8 1189 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 RNF219Q5W0B1 726 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-221ENST00000531068 TRIM72Q6ZMU5 477 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 ARMCX6Q7L4S7 300 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 ARCQ7LC44 396 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 CADM4Q8NFZ8 388 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 EPS8L1Q8TE68 723 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 PGAP3Q96FM1 320 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-221ENST00000531068 NPY6RQ99463 290 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 EDEM2Q9BV94 578 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 SLC6A17Q9H1V8 727 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 L2HGDHQ9H9P8 463 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 WSB2Q9NYS7 404 aaPredicted RBP11.34□□□□□ -0.59
CAPN1-221ENST00000531068 USP36Q9P275 1121 aaKnown RBP11.34□□□□□ -0.59
CAPN1-221ENST00000531068 SUSD2Q9UGT4 822 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 XPO7Q9UIA9 1087 aaKnown RBP11.34□□□□□ -0.59
CAPN1-221ENST00000531068 PILRBQ9UKJ0 227 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 WDR87Q6ZQQ6 2873 aa11.34□□□□□ -0.59
CAPN1-221ENST00000531068 FRYLO94915 3013 aa11.33□□□□□ -0.6
CAPN1-221ENST00000531068 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms